RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 RPS20P60866 119 aaKnown RBP0.95□□□□□ -2.26
SMC4-205ENST00000465563 PSME3P61289 254 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 RANP62826 216 aaKnown RBP0.95□□□□□ -2.26
SMC4-205ENST00000465563 ZNF846Q147U1 533 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 NDUFA5Q16718 116 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 RGS21Q2M5E4 152 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 RPL22L1Q6P5R6 122 aaKnown RBP0.95□□□□□ -2.26
SMC4-205ENST00000465563 CLDN22Q8N7P3 220 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 TERB2Q8NHR7 220 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 C10orf105Q8TEF2 133 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 SBF1O95248 1867 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 NEO1Q92859 1461 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 PQLC2LA1A4F0 135 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 PSMD12O00232 456 aaPredicted RBP0.94□□□□□ -2.26
SMC4-205ENST00000465563 SDCBPO00560 298 aaPredicted RBP0.94□□□□□ -2.26
SMC4-205ENST00000465563 TNNC2P02585 160 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 PMP2P02689 132 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 TTRP02766 147 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 CTSDP07339 412 aaPredicted RBP0.94□□□□□ -2.26
SMC4-205ENST00000465563 MYL6P60660 151 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 LSM6P62312 80 aaKnown RBP0.94□□□□□ -2.26
SMC4-205ENST00000465563 HBA1P69905 142 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 STX5Q13190 355 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 KCNJ8Q15842 424 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 LPCAT3Q6P1A2 487 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 LCN15Q6UWW0 184 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 YIPF3Q9GZM5 350 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 C20orf27Q9GZN8 174 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 C11orf68Q9H3H3 251 aaKnown RBP0.94□□□□□ -2.26
SMC4-205ENST00000465563 PRTFDC1Q9NRG1 225 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 MED9Q9NWA0 146 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 ROBO3Q96MS0 1386 aa0.94□□□□□ -2.26
SMC4-205ENST00000465563 MYO3BQ8WXR4 1341 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 ZFYVE9O95405 1425 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 A0A087WUJ7 227 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 IGKV3D-7A0A0C4DH55 119 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 IGKV3OR2-268A0A0C4DH90 116 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 BUB1B-PAK6H3BSN5 160 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 LYPLA2O95372 231 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 RUNX1Q01196 453 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 SPANXN3Q5MJ09 141 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 C10orf55Q5SWW7 151 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 Q6ZQT0 140 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 ZNF826PQ6ZT77 177 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 C12orf45Q8N5I9 185 aaPredicted RBP0.93□□□□□ -2.26
SMC4-205ENST00000465563 H1FXQ92522 213 aaKnown RBP0.93□□□□□ -2.26
SMC4-205ENST00000465563 TOMM6Q96B49 74 aa0.93□□□□□ -2.26
SMC4-205ENST00000465563 TTC21AQ8NDW8 1320 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 TRAV26-2A0A0B4J265 109 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 EXOC1LA0A1B0GW35 172 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 DPRXA6NFQ7 191 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 OR4C46A6NHA9 309 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 SMIM23A6NLE4 172 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 HCRTO43612 131 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 TCRBP04435 133 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 EIF2B2P49770 351 aaKnown RBP0.92□□□□□ -2.26
SMC4-205ENST00000465563 CDK5R1Q15078 307 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 TMEM106AQ96A25 262 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 C8orf76Q96K31 380 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 SCGB3A1Q96QR1 104 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 TMEM56-RWDD3S4R434 201 aa0.92□□□□□ -2.26
SMC4-205ENST00000465563 MYH10P35580 1976 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 FAM236DA0A1B0GTK5 79 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 SMIM9A6NGZ8 99 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 GOLGA6L19H0YKK7 550 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 OR2J2O76002 312 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 CNIH1O95406 144 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 HTR1AP08908 422 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 SMIM10L2AP0DMW4 78 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 SMIM10L2BP0DMW5 78 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 FAM236CP0DP71 79 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 OMPP47874 163 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 CDC42P60953 191 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 CTAG1AP78358 180 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 ITGB3BPQ13352 177 aaPredicted RBP0.91□□□□□ -2.26
SMC4-205ENST00000465563 DEFB128Q7Z7B8 93 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 ANKRD29Q8N6D5 301 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 CCDC42Q96M95 316 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 PRAP1Q96NZ9 151 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 UCK1Q9HA47 277 aa0.91□□□□□ -2.26
SMC4-205ENST00000465563 SOX21Q9Y651 276 aaPredicted RBP0.91□□□□□ -2.26
SMC4-205ENST00000465563 IGKV3-7A0A075B6H7 116 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 IGKV1D-42A0A075B6H8 117 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 TMEM212A6NML5 194 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 RPS17P08708 135 aaKnown RBP0.9□□□□□ -2.27
SMC4-205ENST00000465563 UBBP0CG47 229 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 CRYGAP11844 174 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 AESQ08117 197 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 IAH1Q2TAA2 248 aaPredicted RBP0.9□□□□□ -2.27
SMC4-205ENST00000465563 MIR17HGQ75NE6 70 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 RPS19BP1Q86WX3 136 aaKnown RBP0.9□□□□□ -2.27
SMC4-205ENST00000465563 TRAPPC5Q8IUR0 188 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 OR52R1Q8NGF1 315 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 MCFD2Q8NI22 146 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 DCUN1D1Q96GG9 259 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 REG4Q9BYZ8 158 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 COMMD5Q9GZQ3 224 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.9□□□□□ -2.27
SMC4-205ENST00000465563 CKLFQ9UBR5 152 aa0.9□□□□□ -2.27
SMC4-205ENST00000465563 V9GYY5 206 aaPredicted RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms