RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 NGBQ9NPG2 151 aa10.13□□□□□ -0.79
ECHDC1-209ENST00000454591 YLPM1P49750 1951 aaKnown RBP10.13□□□□□ -0.79
ECHDC1-209ENST00000454591 HELTA6NFD8 242 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 IGLV2-8P01709 118 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 MT-ND6P03923 174 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 CRYGCP07315 174 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 GNG4P50150 75 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 PPOXP50336 477 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 Q0VG73 95 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 LBHQ53QV2 105 aaPredicted RBP10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 MOB3BQ86TA1 216 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 TEX45Q8NA69 505 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 RND1Q92730 232 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 C14orf144Q96I85 54 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 IGF2BP2-AS1Q96M15 143 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 GNB1LQ9BYB4 327 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 ZNF430Q9H8G1 570 aaPredicted RBP10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 DNAJC4Q9NNZ3 241 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 AURKAIP1Q9NWT8 199 aaPredicted RBP10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 ZNRD1Q9P1U0 126 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 PLCE1Q9P212 2302 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 TCRBV4S1A1TA0A5B7 111 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 SHISA9B4DS77 424 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 RBP4P02753 201 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 ADMP35318 185 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 RAB4BP61018 213 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 PAFAH1B2P68402 229 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 ZNF90Q03938 601 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 IQCJQ1A5X6 159 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 MRGPRG-AS1Q2M3A8 158 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 VMA21Q3ZAQ7 101 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 CENPWQ5EE01 88 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 MRPL41Q8IXM3 137 aaKnown RBP10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 OR10W1Q8NGF6 305 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 SLC25A2Q9BXI2 301 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 CTSZQ9UBR2 303 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 CDC42EP3Q9UKI2 254 aa10.12□□□□□ -0.79
ECHDC1-209ENST00000454591 SVILO95425 2214 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 TNCP24821 2201 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 IGKV1D-37A0A075B6S9 117 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 A8MWP6 167 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 ACTL6BO94805 426 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 CRYBB3P26998 211 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 CHRNB4P30926 498 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 CX3CL1P78423 397 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 WT1-ASQ06250 92 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 PRSS8Q16651 343 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 TIGITQ495A1 244 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 WDR73Q6P4I2 378 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 GFRALQ6UXV0 394 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 FAM231DQ6ZW35 169 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 DMRTC2Q8IXT2 367 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 MMD2Q8IY49 270 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 C11orf42Q8N5U0 333 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 OR10X1Q8NGY0 326 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 TMEM190Q8WZ59 177 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 ABHD17AQ96GS6 310 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 FRYQ5TBA9 3013 aa10.11□□□□□ -0.79
ECHDC1-209ENST00000454591 OR7C2O60412 319 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 CRYGBP07316 175 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 IGHV1-8P0DP01 117 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 ETFRF1Q6IPR1 90 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 LYPD2Q6UXB3 125 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 TGIF2LXQ8IUE1 241 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 ZNF664Q8N3J9 261 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 FAM122AQ96E09 287 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 SMIM12Q96EX1 92 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 KRTAP3-2Q9BYR7 98 aa10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 FNDC4Q9H6D8 234 aaPredicted RBP10.1□□□□□ -0.79
ECHDC1-209ENST00000454591 SMIM27A0A1W2PRY6 76 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 E7EQL1 145 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 E7EUB6 86 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 MYCNOSP40205 109 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 BPIFB3P59826 476 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 MLANAQ16655 118 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 RASL11AQ6T310 242 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 ZCCHC24Q8N2G6 241 aaKnown RBP10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 STXBP6Q8NFX7 210 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 TRGV9Q99603 122 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 MRPL18Q9H0U6 180 aaKnown RBP10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 TMEM133Q9H2Q1 129 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 TP53TG3Q9ULZ0 132 aa10.09□□□□□ -0.79
ECHDC1-209ENST00000454591 B9A039 149 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 SLC17A3O00476 420 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 IGLV1-47P01700 117 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 GATA2P23769 480 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 APOBEC3AP31941 199 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 COMPP49747 757 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 LINC00310P59036 64 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 PLP1P60201 277 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 ERVFC1-1P60608 527 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 RANP62826 216 aaKnown RBP10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 SUMO1P63165 101 aaKnown RBP10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 PATE2Q6UY27 113 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 TMEM256Q8N2U0 113 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 LINC00469Q8N7U9 141 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms