RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	CGB1	A6NKQ9	187 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058	SLC17A3	O00476	420 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058	CRYBB3	P26998	211 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058	DLX6	P56179	175 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058	DIAPH2-AS1	Q14236	149 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058	LRRC10	Q5BKY1	277 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058	OR10X1	Q8NGY0	326 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058	VSTM2A	Q8TAG5	236 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058	SLC25A33	Q9BSK2	321 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058	CTSZ	Q9UBR2	303 aa		13.71	□□□□□ -0.21
TOM1-210	ENST00000449058		A0A1W2PN81	502 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	HELT	A6NFD8	242 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	GGTLC3	B5MD39	225 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	OR7C2	O60412	319 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	IGLV2-23	P01705	113 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	DDT	P30046	118 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	ZNF137P	P52743	207 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	ZNF90	Q03938	601 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	CENPW	Q5EE01	88 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	GFRAL	Q6UXV0	394 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	RNASE6	Q93091	150 aa	Known RBP	13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	MRPL32	Q9BYC8	188 aa	Known RBP	13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	PRO1933	Q9H354	126 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058		V9GYV3	84 aa		13.71	□□□□□ -0.22
TOM1-210	ENST00000449058	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	OR10J4	P0C629	311 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	C8orf88	P0DMB2	117 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	LOX	P28300	417 aa	Predicted RBP	13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	ADM	P35318	185 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	GNG4	P50150	75 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	LGALS4	P56470	323 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	ARL6IP6	Q8N6S5	226 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	OR2T6	Q8NHC8	308 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	C14orf144	Q96I85	54 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	SH3BGRL2	Q9UJC5	107 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	LAMA5	O15230	3695 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058	CEP250	Q9BV73	2442 aa		13.7	□□□□□ -0.22
TOM1-210	ENST00000449058		A0A087X0M5	115 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058		A0A1B0GX30	115 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058		A0A1W2PRE2	83 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	SELENOT	P62341	195 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	WT1-AS	Q06250	92 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	ASCL5	Q7RTU5	278 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	KAAG1	Q9UBP8	84 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	WASHC3	Q9Y3C0	194 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	VSTM5	A8MXK1	200 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	FAM167A-AS1	Q96KT0	104 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	RNF2	Q99496	336 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	SSUH2	Q9Y2M2	353 aa		13.69	□□□□□ -0.22
TOM1-210	ENST00000449058	OR5I1	Q13606	314 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	RPEL1	Q2QD12	228 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	TMEM155	Q4W5P6	130 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	TMEM256	Q8N2U0	113 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	WFIKKN1	Q96NZ8	548 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	SHISA9	B4DS77	424 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	ERVFC1-1	P60608	527 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	MORN5	Q5VZ52	161 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	MMD2	Q8IY49	270 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	SLC25A2	Q9BXI2	301 aa		13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.68	□□□□□ -0.22
TOM1-210	ENST00000449058	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.68	□□□□□ -0.22
TOM1-210	ENST00000449058		A0A1B0GUS0	222 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	CBLN1	P23435	193 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	NBL1	P41271	181 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	C10orf55	Q5SWW7	151 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	REC114	Q7Z4M0	266 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	MRPL41	Q8IXM3	137 aa	Known RBP	13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	DNAJC4	Q9NNZ3	241 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058		E7EQL1	145 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	NUPR1	O60356	82 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	SUMO1	P63165	101 aa	Known RBP	13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	SSBP2	P81877	361 aa	Predicted RBP	13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	SSX2	Q16385	188 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	UNQ6494/PRO21346	Q6UXR6	183 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	ZNF664	Q8N3J9	261 aa		13.67	□□□□□ -0.22
TOM1-210	ENST00000449058	MRGPRG-AS1	Q2M3A8	158 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	TGIF2LX	Q8IUE1	241 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	MRPL18	Q9H0U6	180 aa	Known RBP	13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	OSTC	Q9NRP0	149 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	RIF1	Q5UIP0	2472 aa	Known RBP	13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	TRAV5	A0A0B4J249	113 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	IGLV2-8	P01709	118 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	MC5R	P33032	325 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	SUB1	P53999	127 aa	Known RBP eCLIP	13.66	□□□□□ -0.22	3e-6	■■■■■ 27.2
TOM1-210	ENST00000449058	TIGIT	Q495A1	244 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	C11orf42	Q8N5U0	333 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	THAP8	Q8NA92	274 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	OR1L6	Q8NGR2	347 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	IGF2BP2-AS1	Q96M15	143 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	DYNLRB1	Q9NP97	96 aa		13.66	□□□□□ -0.22
TOM1-210	ENST00000449058	IGKV1D-37	A0A075B6S9	117 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	IGHV1-8	P0DP01	117 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	PPOX	P50336	477 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	NGB	Q9NPG2	151 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	TP53TG3	Q9ULZ0	132 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	ROS1	P08922	2347 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	TCRBV4S1A1T	A0A5B7	111 aa		13.65	□□□□□ -0.22

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