RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 NGBQ9NPG2 151 aa8.65□□□□□ -1.02
LIN54-202ENST00000442461 KLF13Q9Y2Y9 288 aaPredicted RBP8.65□□□□□ -1.02
LIN54-202ENST00000442461 IFNL4K9M1U5 179 aa8.65□□□□□ -1.02
LIN54-202ENST00000442461 DNAL4O96015 105 aa8.65□□□□□ -1.02
LIN54-202ENST00000442461 CELA3AP09093 270 aa8.65□□□□□ -1.02
LIN54-202ENST00000442461 IFI27L2Q9H2X8 130 aa8.65□□□□□ -1.02
LIN54-202ENST00000442461 PLCE1Q9P212 2302 aa8.65□□□□□ -1.02
LIN54-202ENST00000442461 ANKRD36A6QL64 1941 aa8.65□□□□□ -1.02
LIN54-202ENST00000442461 GTSCR1Q86UQ5 136 aa8.65□□□□□ -1.03
LIN54-202ENST00000442461 DEFB127Q9H1M4 99 aa8.65□□□□□ -1.03
LIN54-202ENST00000442461 EPDR1Q9UM22 224 aa8.65□□□□□ -1.03
LIN54-202ENST00000442461 IGLC1P0CG04 106 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 TNFRSF1AP19438 455 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 GATA2P23769 480 aaPredicted RBP8.64□□□□□ -1.03
LIN54-202ENST00000442461 PRDX2P32119 198 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 MPV17P39210 176 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 RPL27AP46776 148 aaKnown RBP8.64□□□□□ -1.03
LIN54-202ENST00000442461 RPL15P61313 204 aaKnown RBP8.64□□□□□ -1.03
LIN54-202ENST00000442461 CIRBPQ14011 172 aaKnown RBP8.64□□□□□ -1.03
LIN54-202ENST00000442461 MORN2Q502X0 79 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 PRDM14Q9GZV8 571 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 TAF1LQ8IZX4 1826 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 TRAV2A0A0B4J234 112 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 A0A1W2PRD5 423 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 A0A1W2PRF3 423 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 A0A1W2PRM7 423 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 ZNF815PA8K554 130 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 G3V4G9 280 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 C10orf128Q5T292 105 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 LHFPL4Q7Z7J7 247 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 FZR1Q9UM11 496 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 ITGB4P16144 1822 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 A0A0J9YW62 118 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 IGHV4-39P01824 125 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 MESP2Q0VG99 397 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 PAPPA-AS1Q5QFB9 102 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
LIN54-202ENST00000442461 SLC25A48Q6ZT89 311 aaKnown RBP8.64□□□□□ -1.03
LIN54-202ENST00000442461 CRXO43186 299 aaPredicted RBP8.63□□□□□ -1.03
LIN54-202ENST00000442461 LILRA6Q6PI73 481 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 LSM4Q9Y4Z0 139 aaKnown RBP8.63□□□□□ -1.03
LIN54-202ENST00000442461 DOCK5Q9H7D0 1870 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 PHLPP1O60346 1717 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 hCG_38984A0A1B0GV85 526 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 FAM157AC9JC47 383 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 ZNF138P52744 262 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 ZC2HC1BQ5TFG8 222 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 HCP5Q6MZN7 132 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 COPS9Q8WXC6 57 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 CACNG8Q8WXS5 425 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 C1QTNF5Q9BXJ0 243 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 CFHR5Q9BXR6 569 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 JPT1Q9UK76 154 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 A0A1W2PQF6 199 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 TMEM8BA6NDV4 472 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 NUPR1O60356 82 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 DLX6P56179 175 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 SRSF6Q13247 344 aaKnown RBP8.63□□□□□ -1.03
LIN54-202ENST00000442461 TMEM78Q5T7P6 136 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 HAPLN4Q86UW8 402 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 TMEM101Q96IK0 257 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 FER1L6-AS2Q96M78 137 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 MGST2Q99735 147 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 SRSF8Q9BRL6 282 aaKnown RBP8.63□□□□□ -1.03
LIN54-202ENST00000442461 NPFFR1Q9GZQ6 430 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 YAE1D1Q9NRH1 226 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 RNF115Q9Y4L5 304 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 ABCA1O95477 2261 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 H3BMG7 143 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 TNFRSF6BO95407 300 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 APELAP0DMC3 54 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 RSPO4Q2I0M5 234 aaPredicted RBP8.63□□□□□ -1.03
LIN54-202ENST00000442461 EDA2RQ9HAV5 297 aa8.63□□□□□ -1.03
LIN54-202ENST00000442461 DENND4AQ7Z401 1863 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 ARHGEF17Q96PE2 2063 aaPredicted RBP8.62□□□□□ -1.03
LIN54-202ENST00000442461 C12orf77C9JDV5 145 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 M0R1B8 84 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 TAX1BP3O14907 124 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 LOXL3P58215 753 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 GNG5P63218 68 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 IGLV3-21P80748 117 aaPredicted RBP8.62□□□□□ -1.03
LIN54-202ENST00000442461 NUP37Q8NFH4 326 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 ARPC1AQ92747 370 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 INSIG2Q9Y5U4 225 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 IGHV3-48P01763 117 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 ZNF726P1Q15940 193 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 MEIG1Q5JSS6 88 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 J3KRW8 73 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 PTGDSP41222 190 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 TUSC5Q8IXB3 177 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 C1QTNF4Q9BXJ3 329 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 MCM3APO60318 1980 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 ADAMTSL3P82987 1691 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 CEP250Q9BV73 2442 aa8.62□□□□□ -1.03
LIN54-202ENST00000442461 IGKV1-5P01602 117 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 LIFP15018 202 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 GCSAMQ8N6F7 178 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms