RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 H3BUA1 57 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 CORTO00230 105 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 PFDN1O60925 122 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 SCGB2A1O75556 95 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 MPC2O95563 127 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 IGHG4P01861 327 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 CRYGCP07315 174 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 CTRB1P17538 263 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 RAB9AP51151 201 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 CRIP2P52943 208 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-206ENST00000399042 ATP5IP56385 69 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-206ENST00000399042 PDLIM3Q53GG5 364 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-206ENST00000399042 ASPHD1Q5U4P2 390 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 CTRB2Q6GPI1 263 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 OR8G2PQ6IF36 304 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 ETFRF1Q6IPR1 90 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 C10orf99Q6UWK7 81 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 ETV3LQ6ZN32 361 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 C19orf35Q6ZS72 473 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 LCNL1Q6ZST4 164 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 INO80EQ8NBZ0 244 aaPredicted RBP6.99□□□□□ -1.29
BRCC3-206ENST00000399042 NECAP1Q8NC96 275 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 SMIM8Q96KF7 97 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 OR5B12Q96R08 314 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 SLC25A31Q9H0C2 315 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 ZNF580Q9UK33 172 aa6.99□□□□□ -1.29
BRCC3-206ENST00000399042 C2CD3Q4AC94 2353 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 FAM223BA6NKX1 122 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 TSC22D2O75157 780 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 DEDDO75618 318 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 IGHV3-11P01762 117 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 RPLP1P05386 114 aaKnown RBP6.98□□□□□ -1.29
BRCC3-206ENST00000399042 METTL15P1P0C7V9 234 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 RNASE2P10153 161 aaKnown RBP6.98□□□□□ -1.29
BRCC3-206ENST00000399042 CD28P10747 220 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 TAS2R30P59541 319 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 EXOSC2Q13868 293 aaKnown RBP6.98□□□□□ -1.29
BRCC3-206ENST00000399042 C15orf32Q32M92 178 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 NSUN5P1Q3KNT7 163 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 C2orf83Q53S99 150 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 Q56UQ5 140 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 ACSM6Q6P461 480 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 PRSS54Q6PEW0 395 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 FAM223AQ8IWN6 122 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 OR10P1Q8NGE3 313 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 EEF1AKMT3Q96AZ1 226 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 WDR89Q96FK6 387 aaPredicted RBP6.98□□□□□ -1.29
BRCC3-206ENST00000399042 USMG5Q96IX5 58 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 CXorf58Q96LI9 332 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 KLK15Q9H2R5 256 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 RANGRFQ9HD47 186 aaPredicted RBP6.98□□□□□ -1.29
BRCC3-206ENST00000399042 MBD2Q9UBB5 411 aa6.98□□□□□ -1.29
BRCC3-206ENST00000399042 ANKRD34BA5PLL1 514 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 FAM24AA6NFZ4 105 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 INS-IGF2F8WCM5 200 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 SMLR1H3BR10 107 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 SOX15O60248 233 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 CST7O76096 145 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 SCAF4O95104 1147 aaKnown RBP6.97□□□□□ -1.29
BRCC3-206ENST00000399042 NDUFB8O95169 186 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 MT-CO2P00403 227 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 IGLV1-40P01703 118 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 IGHV3-23P01764 117 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 PPIFP30405 207 aaKnown RBP6.97□□□□□ -1.29
BRCC3-206ENST00000399042 P2RY1P47900 373 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 PROK1P58294 105 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 HBG1P69891 147 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 HBG2P69892 147 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 DEFA5Q01523 94 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 ATRQ13535 2644 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 C11orf87Q6NUJ2 197 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 ZNF546Q86UE3 836 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 LILRB2Q8N423 598 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 TMEM217Q8N7C4 229 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 ZNF114Q8NC26 417 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 KLHL30-AS1Q8NEE0 82 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 RNASEH2CQ8TDP1 164 aaKnown RBP6.97□□□□□ -1.29
BRCC3-206ENST00000399042 DPF1Q92782 380 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 ACY3Q96HD9 319 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 SLC35E1Q96K37 410 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 OR5AC2Q9NZP5 309 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 TSSC4Q9Y5U2 329 aaPredicted RBP6.97□□□□□ -1.29
BRCC3-206ENST00000399042 S4R3C0 116 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 ZFHX3Q15911 3703 aa6.97□□□□□ -1.29
BRCC3-206ENST00000399042 TNCP24821 2201 aa6.96□□□□□ -1.29
BRCC3-206ENST00000399042 IGLV11-55A0A075B6I3 123 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 C15orf62A8K5M9 175 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 PLXNB1O43157 2135 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 IGHV3-48P01763 117 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 PSMB8P28062 276 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 NPBWR1P48145 328 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 AP2S1P53680 142 aaPredicted RBP6.96□□□□□ -1.3
BRCC3-206ENST00000399042 MFAP4P55083 255 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 CFHR3Q02985 330 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 AKR1C1Q04828 323 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 SRSF4Q08170 494 aaKnown RBP6.96□□□□□ -1.3
BRCC3-206ENST00000399042 IL15RAQ13261 267 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 C19orf54Q5BKX5 351 aa6.96□□□□□ -1.3
BRCC3-206ENST00000399042 OR1S2Q8NGQ3 325 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms