RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 IAH1Q2TAA2 248 aaPredicted RBP9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 OR52E5Q8NH55 327 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 DTD1Q8TEA8 209 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 RBKSQ9H477 322 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 THYN1Q9P016 225 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 HSPB7Q9UBY9 170 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 C5orf51A6NDU8 294 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 PPP5D1E7EU14 171 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 PITX3O75364 302 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 IAPPP10997 89 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 AARDQ4LEZ3 155 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 OR1P1Q8NH06 330 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 HIPK2Q9H2X6 1198 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 GPN1Q9HCN4 374 aaPredicted RBP9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 IGHV3-35A0A0C4DH35 117 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 WRBO00258 174 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 CYB5BO43169 146 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 BRI3O95415 125 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 PTTG1O95997 202 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 IFNA10P01566 189 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 HIST1H1BP16401 226 aaKnown RBP9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 CD33P20138 364 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 ZNF343Q6P1L6 599 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 SCARB1Q8WTV0 552 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 PALMDQ9NP74 551 aa9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 PEF1Q9UBV8 284 aaKnown RBP9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 PAIP2BQ9ULR5 123 aaKnown RBP9.04□□□□□ -0.96
DEPDC4-202ENST00000378244 LINC01619G3V211 115 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 IL5P05113 134 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 CLEC3BP05452 202 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 RNASE2P10153 161 aaKnown RBP9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 MYCNOSP40205 109 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 MLANAQ16655 118 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 CCDC140Q96MF4 163 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 RANGRFQ9HD47 186 aaPredicted RBP9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 H3BP45 60 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 SIX6O95475 246 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 MT-CO2P00403 227 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 HSPB1P04792 205 aaKnown RBP9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 HOXD3P31249 432 aaPredicted RBP9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 GPR183P32249 361 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 POLR2GP62487 172 aaKnown RBP eCLIP9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 RUNX1Q01196 453 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 TATDN3Q17R31 274 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 RGS21Q2M5E4 152 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 OXLD1Q5BKU9 147 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 LINC00482Q8N8I6 264 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 SLC24A4Q8NFF2 622 aa9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 DLX4Q92988 240 aaPredicted RBP9.03□□□□□ -0.96
DEPDC4-202ENST00000378244 K7EIM0 57 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 SSNA1O43805 119 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 SLC25A6P12236 298 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 IGLL1P15814 213 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 OPRK1P41145 380 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 NKX2-1P43699 371 aaPredicted RBP9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 SUB1P53999 127 aaKnown RBP eCLIP9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 C1QL4Q86Z23 238 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 EEF1AKMT3Q96AZ1 226 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 CXorf58Q96LI9 332 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 OR2T8A6NH00 312 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 GOSR2O14653 212 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 SYNGR2O43760 224 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 PRAF2O60831 178 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 OR2C1O95371 312 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 HTR2BP41595 481 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 FHL3Q13643 280 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 RPEL1Q2QD12 228 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 PDLIM3Q53GG5 364 aaPredicted RBP9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 ZNF114Q8NC26 417 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 OR1L6Q8NGR2 347 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 TMEM170AQ8WVE7 144 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 DCUN1D4Q92564 292 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 C21orf62Q9NYP8 219 aa9.02□□□□□ -0.97
DEPDC4-202ENST00000378244 BMPR1BO00238 502 aa9.01□□□□□ -0.97
DEPDC4-202ENST00000378244 SSSCA1O60232 199 aa9.01□□□□□ -0.97
DEPDC4-202ENST00000378244 OR8U8P0C7N1 319 aa9.01□□□□□ -0.97
DEPDC4-202ENST00000378244 NPY1RP25929 384 aa9.01□□□□□ -0.97
DEPDC4-202ENST00000378244 SYNJ2BPP57105 145 aa9.01□□□□□ -0.97
DEPDC4-202ENST00000378244 Q56UQ5 140 aa9.01□□□□□ -0.97
DEPDC4-202ENST00000378244 ZBTB8BQ8NAP8 495 aaPredicted RBP9.01□□□□□ -0.97
DEPDC4-202ENST00000378244 ZNF502Q8TBZ5 544 aa9.01□□□□□ -0.97
DEPDC4-202ENST00000378244 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9□□□□□ -0.97
DEPDC4-202ENST00000378244 SNRPGP15A8MWD9 76 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 INS-IGF2F8WCM5 200 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 I3L2K1 104 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 IFNA4P05014 189 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 ARL3P36405 182 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 ID3Q02535 119 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 ANKRD39Q53RE8 183 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 SPANXN5Q5MJ07 72 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 GSG1LQ6UXU4 331 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 OR4D5Q8NGN0 318 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 FNDC4Q9H6D8 234 aaPredicted RBP9□□□□□ -0.97
DEPDC4-202ENST00000378244 CACFD1Q9UGQ2 172 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 TRBV7-1A0A0A6YYK4 115 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 G3V4G9 280 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 BSXQ3C1V8 233 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 ACSM6Q6P461 480 aa9□□□□□ -0.97
DEPDC4-202ENST00000378244 LSM5Q9Y4Y9 91 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 242 ms