RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 COMMD5Q9GZQ3 224 aa20.56■□□□□ 0.88
C9orf40-201ENST00000376854 TIGITQ495A1 244 aa20.56■□□□□ 0.88
C9orf40-201ENST00000376854 RNASE7Q9H1E1 156 aaKnown RBP20.56■□□□□ 0.88
C9orf40-201ENST00000376854 DMXL2Q8TDJ6 3036 aa20.56■□□□□ 0.88
C9orf40-201ENST00000376854 SERF1AO75920 110 aa20.55■□□□□ 0.88
C9orf40-201ENST00000376854 CHRNB4P30926 498 aa20.55■□□□□ 0.88
C9orf40-201ENST00000376854 SUMO1P63165 101 aaKnown RBP20.55■□□□□ 0.88
C9orf40-201ENST00000376854 SLC25A33Q9BSK2 321 aa20.55■□□□□ 0.88
C9orf40-201ENST00000376854 NDUFA4L2Q9NRX3 87 aa20.55■□□□□ 0.88
C9orf40-201ENST00000376854 TNCP24821 2201 aa20.55■□□□□ 0.88
C9orf40-201ENST00000376854 C8orf88P0DMB2 117 aa20.55■□□□□ 0.88
C9orf40-201ENST00000376854 PAFAH1B2P68402 229 aa20.55■□□□□ 0.88
C9orf40-201ENST00000376854 C1orf194Q5T5A4 169 aa20.55■□□□□ 0.88
C9orf40-201ENST00000376854 YLPM1P49750 1951 aaKnown RBP20.55■□□□□ 0.88
C9orf40-201ENST00000376854 SPTBN2O15020 2390 aa20.55■□□□□ 0.88
C9orf40-201ENST00000376854 H0YJW9 148 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 CRYABP02511 175 aaKnown RBP20.54■□□□□ 0.88
C9orf40-201ENST00000376854 CCL3L1P16619 93 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 TNFRSF1AP19438 455 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 PRSS33Q8NF86 280 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 GNB1LQ9BYB4 327 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 TMEM106BQ9NUM4 274 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 TRBV9A0A0B4J1U6 114 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 ZNF705FA8MVS1 300 aaPredicted RBP20.54■□□□□ 0.88
C9orf40-201ENST00000376854 DLL1O00548 723 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 ZNF705DP0CH99 300 aaPredicted RBP20.54■□□□□ 0.88
C9orf40-201ENST00000376854 ZNF705BP0CI00 300 aaPredicted RBP20.54■□□□□ 0.88
C9orf40-201ENST00000376854 ESDP10768 282 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 RPL8P62917 257 aaKnown RBP20.54■□□□□ 0.88
C9orf40-201ENST00000376854 ERHP84090 104 aaKnown RBP20.54■□□□□ 0.88
C9orf40-201ENST00000376854 TMEM108Q6UXF1 575 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 ST6GALNAC3Q8NDV1 305 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 OR2T6Q8NHC8 308 aa20.54■□□□□ 0.88
C9orf40-201ENST00000376854 PIEZO2Q9H5I5 2752 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 A0A1W2PRE2 83 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 REG1BP48304 166 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 RANP62826 216 aaKnown RBP20.53■□□□□ 0.88
C9orf40-201ENST00000376854 MEF2CQ06413 473 aaPredicted RBP20.53■□□□□ 0.88
C9orf40-201ENST00000376854 Q6ZWC4 215 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 BAGE3Q86Y29 109 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 BAGE2Q86Y30 109 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 FAM57AQ8TBR7 257 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 CACNG8Q8WXS5 425 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 OSTCQ9NRP0 149 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 DYSFO75923 2080 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 CD33P20138 364 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 FXYD3Q14802 87 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 ZCCHC24Q8N2G6 241 aaKnown RBP20.53■□□□□ 0.88
C9orf40-201ENST00000376854 ZNF714Q96N38 554 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 TBX15Q96SF7 602 aa20.53■□□□□ 0.88
C9orf40-201ENST00000376854 SPINK4O60575 86 aa20.52■□□□□ 0.88
C9orf40-201ENST00000376854 OR5AN1Q8NGI8 311 aa20.52■□□□□ 0.88
C9orf40-201ENST00000376854 FLYWCH2Q96CP2 140 aaKnown RBP20.52■□□□□ 0.88
C9orf40-201ENST00000376854 MRPL32Q9BYC8 188 aaKnown RBP20.52■□□□□ 0.88
C9orf40-201ENST00000376854 KIR2DL5BA0A0G2JN68 375 aa20.52■□□□□ 0.87
C9orf40-201ENST00000376854 KIR2DL5BA0A0G2JPC4 375 aa20.52■□□□□ 0.87
C9orf40-201ENST00000376854 CX3CL1P78423 397 aa20.52■□□□□ 0.87
C9orf40-201ENST00000376854 TMEM177Q53S58 311 aa20.52■□□□□ 0.87
C9orf40-201ENST00000376854 DMRTC2Q8IXT2 367 aaPredicted RBP20.52■□□□□ 0.87
C9orf40-201ENST00000376854 KIR2DL5AQ8N109 375 aa20.52■□□□□ 0.87
C9orf40-201ENST00000376854 E7EUB6 86 aa20.51■□□□□ 0.87
C9orf40-201ENST00000376854 RPL19P84098 196 aaKnown RBP20.51■□□□□ 0.87
C9orf40-201ENST00000376854 Q0VG73 95 aa20.51■□□□□ 0.87
C9orf40-201ENST00000376854 MORN5Q5VZ52 161 aa20.51■□□□□ 0.87
C9orf40-201ENST00000376854 TMEM200BQ69YZ2 307 aa20.51■□□□□ 0.87
C9orf40-201ENST00000376854 SLC25A2Q9BXI2 301 aa20.51■□□□□ 0.87
C9orf40-201ENST00000376854 TRAV5A0A0B4J249 113 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 C17orf100A8MU93 164 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 F2Z2F3 143 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 ISLRO14498 428 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 EREGO14944 169 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 PPOXP50336 477 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 NAT8BQ9UHF3 227 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 PSMB11A5LHX3 300 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 IGLV2-8P01709 118 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 MGST1P10620 155 aaKnown RBP20.5■□□□□ 0.87
C9orf40-201ENST00000376854 USF1P22415 310 aaPredicted RBP20.5■□□□□ 0.87
C9orf40-201ENST00000376854 UBE2L3P68036 154 aaKnown RBP20.5■□□□□ 0.87
C9orf40-201ENST00000376854 ADIPOQQ15848 244 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 WFDC8Q8IUA0 241 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 FAM167A-AS1Q96KT0 104 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 IGF2BP2-AS1Q96M15 143 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 HSPB9Q9BQS6 159 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 DNAJC4Q9NNZ3 241 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 CBLN4Q9NTU7 201 aa20.5■□□□□ 0.87
C9orf40-201ENST00000376854 FCN3O75636 299 aa20.49■□□□□ 0.87
C9orf40-201ENST00000376854 TOMM20LQ6UXN7 152 aa20.49■□□□□ 0.87
C9orf40-201ENST00000376854 A0A1W2PN81 502 aa20.49■□□□□ 0.87
C9orf40-201ENST00000376854 TCL1AP56279 114 aa20.49■□□□□ 0.87
C9orf40-201ENST00000376854 SLC35B1P78383 322 aa20.49■□□□□ 0.87
C9orf40-201ENST00000376854 WDR73Q6P4I2 378 aa20.49■□□□□ 0.87
C9orf40-201ENST00000376854 OR10X1Q8NGY0 326 aa20.49■□□□□ 0.87
C9orf40-201ENST00000376854 RNF2Q99496 336 aa20.49■□□□□ 0.87
C9orf40-201ENST00000376854 MUC6Q6W4X9 2439 aa20.49■□□□□ 0.87
C9orf40-201ENST00000376854 ADGRG4Q8IZF6 3080 aa20.48■□□□□ 0.87
C9orf40-201ENST00000376854 KALRNO60229 2985 aa20.48■□□□□ 0.87
C9orf40-201ENST00000376854 MT-ND6P03923 174 aa20.48■□□□□ 0.87
C9orf40-201ENST00000376854 SSBP2P81877 361 aaPredicted RBP20.48■□□□□ 0.87
C9orf40-201ENST00000376854 IBA57Q5T440 356 aaKnown RBP20.48■□□□□ 0.87
C9orf40-201ENST00000376854 OR5AU1Q8NGC0 362 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms