RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TMEM144Q7Z5S9 345 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 TRGC1P0CF51 173 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 USF1P22415 310 aaPredicted RBP12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 ERHP84090 104 aaKnown RBP12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 LHFPL4Q7Z7J7 247 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 LINC01551Q86U37 167 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 LINC00311Q8N616 119 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 PCGF1Q9BSM1 259 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 FNDC4Q9H6D8 234 aaPredicted RBP12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 KCNIP2Q9NS61 270 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 MRPL36Q9P0J6 103 aaKnown RBP12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 PDE6DO43924 150 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 CD69Q07108 199 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 PSG5Q15238 335 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 MORN5Q5VZ52 161 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 TMEM167AQ8TBQ9 72 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 CTDSP1Q9GZU7 261 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 ONECUT1Q9UBC0 465 aa12.89□□□□□ -0.35
CNKSR1-202ENST00000374253 PPIAL4CA0A0B4J2A2 164 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 A0A0U1RQK1 487 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 PFN1P07737 140 aaKnown RBP12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 PPIAL4GP0DN37 164 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 ZFHX3Q15911 3703 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 TRAV5A0A0B4J249 113 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 A0A1W2PPI3 338 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 IFITM10A6NMD0 228 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 OR7C2O60412 319 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 IGHV2-70P01814 119 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 ZNF596Q8TC21 504 aa12.88□□□□□ -0.35
CNKSR1-202ENST00000374253 A0A1W2PRD5 423 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 A0A1W2PRF3 423 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 A0A1W2PRM7 423 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 DLL1O00548 723 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 SOD3P08294 240 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 ZNF90Q03938 601 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 MRGPRG-AS1Q2M3A8 158 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 FBXL19-AS1Q494R0 122 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 TMEM37Q8WXS4 190 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 NPIPB3Q92617 1050 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 OR5B12Q96R08 314 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 A0A087X0M5 115 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 A0A1B0GX30 115 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 TNXAQ16473 311 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 UHRF2Q96PU4 802 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 FUT9Q9Y231 359 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 PIEZO1Q92508 2521 aa12.87□□□□□ -0.35
CNKSR1-202ENST00000374253 PKD1L2Q7Z442 2459 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 TRBV24-1A0A075B6N3 115 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 C22orf46C9J442 243 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 AREGP15514 252 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 HLA-DRB5Q30154 266 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 VMA21Q3ZAQ7 101 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 PNKDQ8N490 385 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 VSTM2AQ8TAG5 236 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 ZNF503Q96F45 646 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 INSIG2Q9Y5U4 225 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 TRBV23-1A0A0A0MS06 115 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 CD24P25063 80 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 ARF6P62330 175 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 TMEM249Q2WGJ8 235 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 SLC35E1Q96K37 410 aa12.86□□□□□ -0.35
CNKSR1-202ENST00000374253 IGLV1-47P01700 117 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 ZNF137PP52743 207 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 PRSS8Q16651 343 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 LDLRAD2Q5SZI1 272 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 CLEC7AQ9BXN2 247 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 IGHV1-3A0A0C4DH29 117 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 F6UZH7 168 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 BUB1B-PAK6H3BSN5 160 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 S100PP25815 95 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 IL3RAP26951 378 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 C8orf31Q8N9H6 132 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 OCC1Q8TAD7 63 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 GPR61Q9BZJ8 451 aa12.85□□□□□ -0.35
CNKSR1-202ENST00000374253 A0A1W2PN81 502 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 MOSP00540 346 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 S100A9P06702 114 aaKnown RBP12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 HOXA5P20719 270 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 MC5RP33032 325 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 FAM71F2Q6NXP2 309 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 OR4X1Q8NH49 305 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 CELSR1Q9NYQ6 3014 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 VENTXO95231 258 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 PRRX1P54821 245 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 KLRD1Q13241 179 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 OR8B3Q8NGG8 313 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 OR8B2Q96RD0 313 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 FBXL15Q9H469 300 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 NIT2Q9NQR4 276 aa12.84□□□□□ -0.35
CNKSR1-202ENST00000374253 A0A1W2PPR1 153 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 PHOX2AO14813 284 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 NDUFS7O75251 213 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 CRYBB3P26998 211 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 MFAP2P55001 183 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 RPEQ96AT9 228 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 HILPDAQ9Y5L2 63 aa12.83□□□□□ -0.36
CNKSR1-202ENST00000374253 CACNA1BQ00975 2339 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms