RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 HIST2H2BEQ16778 126 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.03□□□□□ -1.92
RNF38-203ENST00000353739 FAM78BQ5VT40 261 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 PVRIGQ6DKI7 326 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 VKORC1L1Q8N0U8 176 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 HIST3H2BBQ8N257 126 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 RPRMLQ8N4K4 120 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 HIST1H2BHQ93079 126 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 SNRNP40Q96DI7 357 aaKnown RBP3.03□□□□□ -1.92
RNF38-203ENST00000353739 HIST1H2BNQ99877 126 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 HIST1H2BMQ99879 126 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 PATZ1Q9HBE1 687 aaKnown RBP3.03□□□□□ -1.92
RNF38-203ENST00000353739 CBLN4Q9NTU7 201 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 SOX21Q9Y651 276 aaPredicted RBP3.03□□□□□ -1.92
RNF38-203ENST00000353739 ZNF407Q9C0G0 2248 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 ZZEF1O43149 2961 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 XKRY2A2RUG3 117 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 E7EQL1 145 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 NDUFB4O95168 129 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 RANP62826 216 aaKnown RBP3.03□□□□□ -1.92
RNF38-203ENST00000353739 ZNF90Q03938 601 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 GAMTQ14353 236 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 SPRNQ5BIV9 151 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 Q8N7P7 452 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 RPEQ96AT9 228 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 NOL4LQ96MY1 436 aaPredicted RBP3.03□□□□□ -1.92
RNF38-203ENST00000353739 NIT2Q9NQR4 276 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 GVINP1Q7Z2Y8 2422 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 TANC2Q9HCD6 1990 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 IGHV2-26A0A0B4J1V2 119 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 A0A0U1RQK1 487 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 A0A1W2PPE3 182 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 A0A1W2PPQ1 181 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 ZNF320A2RRD8 509 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 FBLL1A6NHQ2 334 aaKnown RBP3.03□□□□□ -1.92
RNF38-203ENST00000353739 GATCO43716 136 aaKnown RBP3.03□□□□□ -1.92
RNF38-203ENST00000353739 OR7C2O60412 319 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 PROP1O75360 226 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 IGHV2-70P01814 119 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 ATP5G3P48201 142 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 ZNF343Q6P1L6 599 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 ZCCHC24Q8N2G6 241 aaKnown RBP3.03□□□□□ -1.92
RNF38-203ENST00000353739 ABHD5Q8WTS1 349 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 SSMEM1Q8WWF3 244 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 FMC1Q96HJ9 113 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 PAXXQ9BUH6 204 aa3.03□□□□□ -1.92
RNF38-203ENST00000353739 K7EQM0 130 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 ENSAO43768 121 aaKnown RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 IGLV2-23P01705 113 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 AMY1AP04745 511 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 LINC00869P0C866 280 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 GPR6P46095 362 aaPredicted RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 TPPP2P59282 170 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 PKIAP61925 76 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 UBE2L3P68036 154 aaKnown RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 FAM201AQ5SY85 155 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 DMRTC2Q8IXT2 367 aaPredicted RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 MUC15Q8N387 334 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 LEAP2Q969E1 77 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 GRAMD2BQ96HH9 432 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 GNB1LQ9BYB4 327 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 CEP250Q9BV73 2442 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 PPIAL4CA0A0B4J2A2 164 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 PCP4L1A6NKN8 68 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 C22orf46C9J442 243 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 ISLRO14498 428 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 ATXN7O15265 892 aaPredicted RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 PPIAL4GP0DN37 164 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 RAB4AP20338 218 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 YPEL3P61236 119 aaPredicted RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 PLGLAQ15195 96 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 PRSS8Q16651 343 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 IQCJQ1A5X6 159 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 TM4SF20Q53R12 229 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 MINOS1Q5TGZ0 78 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 FAM231DQ6ZW35 169 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 OR4X1Q8NH49 305 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 FRZBQ92765 325 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 EAF1Q96JC9 268 aaPredicted RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 DOCK7Q96N67 2140 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 TMEM14CQ9P0S9 112 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 CDC42EP3Q9UKI2 254 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 CHTOPQ9Y3Y2 248 aaKnown RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 YTHDF2Q9Y5A9 579 aaKnown RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 INSIG2Q9Y5U4 225 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 MINOS1-NBL1R4GNA1 71 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 MUC6Q6W4X9 2439 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 CACNA1GO43497 2377 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 RAI1Q7Z5J4 1906 aaPredicted RBP3.02□□□□□ -1.93
RNF38-203ENST00000353739 TRBV6-1A0A0K0K1D8 114 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 SERTM2A0A1B0GWG4 89 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 SCO2A0A1W2PP80 73 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 BUB1B-PAK6H3BSN5 160 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 CCL21O00585 134 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 C1QTNF9P0C862 333 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 PLP1P60201 277 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 ERVFC1-1P60608 527 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 UBE2G1P62253 170 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 TNXAQ16473 311 aa3.02□□□□□ -1.93
RNF38-203ENST00000353739 DMRTA1Q5VZB9 504 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms