RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 KIR2DL5BA0A0G2JPC4 375 aa16.2■□□□□ 0.18
CRLF3-201ENST00000324238 KBTBD11-OT1A0A1B0GTJ5 212 aa16.2■□□□□ 0.18
CRLF3-201ENST00000324238 TMEM249Q2WGJ8 235 aa16.2■□□□□ 0.18
CRLF3-201ENST00000324238 TRAT1Q6PIZ9 186 aa16.2■□□□□ 0.18
CRLF3-201ENST00000324238 KIR2DL5AQ8N109 375 aa16.2■□□□□ 0.18
CRLF3-201ENST00000324238 ZZEF1O43149 2961 aa16.2■□□□□ 0.18
CRLF3-201ENST00000324238 KLF3P57682 345 aaPredicted RBP16.2■□□□□ 0.18
CRLF3-201ENST00000324238 PYYP10082 97 aa16.2■□□□□ 0.18
CRLF3-201ENST00000324238 SLC45A2Q9UMX9 530 aa16.2■□□□□ 0.18
CRLF3-201ENST00000324238 MED13LQ71F56 2210 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 TRGV10A0A0A0MS01 117 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 CT45A6P0DMU7 189 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 CT45A5P0DMU8 189 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 CT45A7P0DMV0 189 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 CHRNB4P30926 498 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 LBHQ53QV2 105 aaPredicted RBP16.19■□□□□ 0.18
CRLF3-201ENST00000324238 CGB3P0DN86 165 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 CGB7P0DN87 165 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 NTF3P20783 257 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 DIAPH2-AS1Q14236 149 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 SLC35D1Q9NTN3 355 aa16.19■□□□□ 0.18
CRLF3-201ENST00000324238 TEX50A0A1B0GTY4 177 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 RAB4AP20338 218 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 SRIP30626 198 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 AMTP48728 403 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 SELENOTP62341 195 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 PRR27Q6MZM9 219 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 WNT10AQ9GZT5 417 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 FOXA2Q9Y261 457 aaPredicted RBP16.18■□□□□ 0.18
CRLF3-201ENST00000324238 TBL2Q9Y4P3 447 aaKnown RBP16.18■□□□□ 0.18
CRLF3-201ENST00000324238 MT-CO2P00403 227 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 CCL3L1P16619 93 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 SIGLECL1Q8N7X8 197 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 NEUROG1Q92886 237 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 DSCAML1Q8TD84 2053 aa16.18■□□□□ 0.18
CRLF3-201ENST00000324238 TRGV8A0A0C4DH27 118 aa16.17■□□□□ 0.18
CRLF3-201ENST00000324238 VAMP8Q9BV40 100 aa16.17■□□□□ 0.18
CRLF3-201ENST00000324238 ZNF253O75346 499 aa16.17■□□□□ 0.18
CRLF3-201ENST00000324238 REG1AP05451 166 aa16.17■□□□□ 0.18
CRLF3-201ENST00000324238 SAA1P0DJI8 122 aaPredicted RBP16.17■□□□□ 0.18
CRLF3-201ENST00000324238 IL19Q9UHD0 177 aa16.17■□□□□ 0.18
CRLF3-201ENST00000324238 FAM90A9PA6NNJ1 464 aa16.17■□□□□ 0.18
CRLF3-201ENST00000324238 COMPP49747 757 aaPredicted RBP16.17■□□□□ 0.18
CRLF3-201ENST00000324238 TIGITQ495A1 244 aa16.17■□□□□ 0.18
CRLF3-201ENST00000324238 C19orf35Q6ZS72 473 aa16.17■□□□□ 0.18
CRLF3-201ENST00000324238 ZADH2Q8N4Q0 377 aa16.17■□□□□ 0.18
CRLF3-201ENST00000324238 H3BTX0 84 aa16.16■□□□□ 0.18
CRLF3-201ENST00000324238 DLX1P56177 255 aa16.16■□□□□ 0.18
CRLF3-201ENST00000324238 RPH3ALQ9UNE2 315 aa16.16■□□□□ 0.18
CRLF3-201ENST00000324238 FAM215AQ9Y5M1 114 aa16.16■□□□□ 0.18
CRLF3-201ENST00000324238 IGHV3-21A0A0B4J1V1 117 aa16.16■□□□□ 0.18
CRLF3-201ENST00000324238 TNFAIP6P98066 277 aaPredicted RBP16.16■□□□□ 0.18
CRLF3-201ENST00000324238 MAJINQ3KP22 176 aa16.16■□□□□ 0.18
CRLF3-201ENST00000324238 C11orf52Q96A22 123 aa16.16■□□□□ 0.18
CRLF3-201ENST00000324238 TXNDC17Q9BRA2 123 aa16.16■□□□□ 0.18
CRLF3-201ENST00000324238 DYSFO75923 2080 aa16.16■□□□□ 0.18
CRLF3-201ENST00000324238 LHBP01229 141 aa16.15■□□□□ 0.18
CRLF3-201ENST00000324238 AREGP15514 252 aa16.15■□□□□ 0.18
CRLF3-201ENST00000324238 GPR6P46095 362 aaPredicted RBP16.15■□□□□ 0.18
CRLF3-201ENST00000324238 RAB7AP51149 207 aa16.15■□□□□ 0.18
CRLF3-201ENST00000324238 C1orf162Q8NEQ5 155 aaPredicted RBP16.15■□□□□ 0.18
CRLF3-201ENST00000324238 MRPL20Q9BYC9 149 aaKnown RBP16.15■□□□□ 0.18
CRLF3-201ENST00000324238 DCHS2Q6V1P9 2916 aa16.15■□□□□ 0.18
CRLF3-201ENST00000324238 NPSP0C0P6 89 aa16.15■□□□□ 0.18
CRLF3-201ENST00000324238 IBA57Q5T440 356 aaKnown RBP16.15■□□□□ 0.18
CRLF3-201ENST00000324238 LCN12Q6JVE5 192 aa16.15■□□□□ 0.18
CRLF3-201ENST00000324238 GAFA1Q96PS6 74 aa16.15■□□□□ 0.18
CRLF3-201ENST00000324238 ZNF355PQ9NSJ1 428 aa16.15■□□□□ 0.18
CRLF3-201ENST00000324238 TECRQ9NZ01 308 aaKnown RBP16.15■□□□□ 0.18
CRLF3-201ENST00000324238 DIRC3C9JPN6 131 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 UPK2O00526 184 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 IGLV2-8P01709 118 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 CD24P25063 80 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 TMEM136Q6ZRR5 245 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 SSBP4Q9BWG4 385 aaPredicted RBP16.14■□□□□ 0.17
CRLF3-201ENST00000324238 NRN1Q9NPD7 142 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 ATRXP46100 2492 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 RAI1Q7Z5J4 1906 aaPredicted RBP16.14■□□□□ 0.17
CRLF3-201ENST00000324238 C9JCJ5 164 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 GPX1P07203 203 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 GNG5P63218 68 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 IGHV1-46P01743 117 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 UBE2L3P68036 154 aaKnown RBP16.14■□□□□ 0.17
CRLF3-201ENST00000324238 PAFAH1B2P68402 229 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 CR1LQ2VPA4 569 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 RUSC1-AS1Q66K80 236 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 RNF7Q9UBF6 113 aa16.14■□□□□ 0.17
CRLF3-201ENST00000324238 BMPR1BO00238 502 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 KIR2DS2P43631 304 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 RANP62826 216 aaKnown RBP16.13■□□□□ 0.17
CRLF3-201ENST00000324238 PRCDQ00LT1 54 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 TEX43Q6ZNM6 134 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 ZNF439Q8NDP4 499 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 MRPL36Q9P0J6 103 aaKnown RBP16.13■□□□□ 0.17
CRLF3-201ENST00000324238 A0A1W2PN81 502 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 A0A1W2PS18 150 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 CX3CL1P78423 397 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 SLAQ13239 276 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 PIP4P1Q86T03 277 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 WFDC8Q8IUA0 241 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms