RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 RELQ04864 619 aaPredicted RBP14.33□□□□□ -0.12
GABRB3-202ENST00000311550 GNG5P63218 68 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 SRSF9Q13242 221 aaKnown RBP eCLIP14.32□□□□□ -0.12
GABRB3-202ENST00000311550 FOXA2Q9Y261 457 aaPredicted RBP14.32□□□□□ -0.12
GABRB3-202ENST00000311550 ZNF407Q9C0G0 2248 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 IGHV3OR16-10A0A075B7F0 116 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 LYL1P12980 280 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 HERPUD1Q15011 391 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 C14orf144Q96I85 54 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 NBASA2RRP1 2371 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 UCNP55089 124 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 EFNB3Q15768 340 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 MBNL2Q5VZF2 373 aaKnown RBP14.32□□□□□ -0.12
GABRB3-202ENST00000311550 SLC25A34Q6PIV7 304 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 TRAV30A0A087WSZ9 112 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 PYYP10082 97 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 MST1LQ2TV78 715 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 FOXL2NBQ6ZUU3 175 aa14.32□□□□□ -0.12
GABRB3-202ENST00000311550 IGHV3-49A0A0A0MS15 119 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 LRRK1Q38SD2 2015 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 ANOS1P23352 680 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 C2orf83Q53S99 150 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 LEMD1Q68G75 181 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 FRMPD3Q5JV73 1810 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 TREML4Q6UXN2 200 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 Q6ZRM9 215 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 DMRTA2Q96SC8 542 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 TMPRSS3P57727 454 aa14.31□□□□□ -0.12
GABRB3-202ENST00000311550 MEF2CQ06413 473 aaPredicted RBP14.3□□□□□ -0.12
GABRB3-202ENST00000311550 CACNG8Q8WXS5 425 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 OR10W1Q8NGF6 305 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 IGKV1D-33P01593 117 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 IGKV1-33P01594 117 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 PSG9Q00887 426 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 HIST1H2BLQ99880 126 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 PKDREJQ9NTG1 2253 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 DCAF16Q9NXF7 216 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 IGHV3-66A0A0C4DH42 116 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 FOXI3A8MTJ6 420 aaPredicted RBP14.3□□□□□ -0.12
GABRB3-202ENST00000311550 DGAT2L7PQ6IED9 249 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 HLA-DRB1P01911 266 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 CX3CL1P78423 397 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 LY6EQ16553 131 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 OR10AG1Q8NH19 301 aa14.3□□□□□ -0.12
GABRB3-202ENST00000311550 PRB4P10163 310 aaPredicted RBP14.29□□□□□ -0.12
GABRB3-202ENST00000311550 ST6GALNAC6Q969X2 333 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 KCNS1Q96KK3 526 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 DERL1Q9BUN8 251 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 TRAV3A0A0B4J244 114 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 CEACAM1P13688 526 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 SPATA31B1PQ5VZV4 182 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 Q6P435 159 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 CD177Q8N6Q3 437 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 SSBP4Q9BWG4 385 aaPredicted RBP14.29□□□□□ -0.12
GABRB3-202ENST00000311550 TICRRQ7Z2Z1 1910 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 LYNX1G3V0Z9 82 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 LYNX1P0DP58 116 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 LHFPL4Q7Z7J7 247 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 OR10J6PQ8NGY7 276 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 RAB37Q96AX2 223 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 HERVK_113P61574 105 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 ZNF502Q8TBZ5 544 aa14.29□□□□□ -0.12
GABRB3-202ENST00000311550 HIGD1CA8MV81 97 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 CYB5R2Q6BCY4 276 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 ZNF600Q6ZNG1 722 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 HIST3H2BBQ8N257 126 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 AP5S1Q9NUS5 200 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 SRRM5B3KS81 715 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 ST6GALNAC3Q8NDV1 305 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 RNASEH2CQ8TDP1 164 aaKnown RBP14.28□□□□□ -0.12
GABRB3-202ENST00000311550 MAP1LC3AQ9H492 121 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 DPM3Q9P2X0 92 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 MYO7BQ6PIF6 2116 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 C12orf54Q6X4T0 127 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 TEX45Q8NA69 505 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 GGTLC1Q9BX51 225 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 HEATR1Q9H583 2144 aaKnown RBP14.28□□□□□ -0.12
GABRB3-202ENST00000311550 LINC00473A8K010 186 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 IGHV1-46P01743 117 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 CD24P25063 80 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 PSMB2P49721 201 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 TMEM70Q9BUB7 260 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 F11RQ9Y624 299 aaKnown RBP14.28□□□□□ -0.12
GABRB3-202ENST00000311550 TRAV1-1A0A0B4J248 108 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 CA1P00915 261 aaPredicted RBP14.28□□□□□ -0.12
GABRB3-202ENST00000311550 TM4SF20Q53R12 229 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 C10orf55Q5SWW7 151 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 TMEM14EPQ6UXP3 125 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 KLK15Q9H2R5 256 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 Q9H3A6 140 aa14.28□□□□□ -0.12
GABRB3-202ENST00000311550 TEX38Q6PEX7 206 aa14.27□□□□□ -0.12
GABRB3-202ENST00000311550 ASCL4Q6XD76 172 aa14.27□□□□□ -0.12
GABRB3-202ENST00000311550 LIME1Q9H400 295 aa14.27□□□□□ -0.12
GABRB3-202ENST00000311550 ZNF207O43670 478 aaKnown RBP14.27□□□□□ -0.12
GABRB3-202ENST00000311550 DENND4CQ5VZ89 1909 aa14.27□□□□□ -0.12
GABRB3-202ENST00000311550 TRAV5A0A0B4J249 113 aa14.27□□□□□ -0.13
GABRB3-202ENST00000311550 IGKV1-6A0A0C4DH72 117 aa14.27□□□□□ -0.13
GABRB3-202ENST00000311550 A0A1B0GW64 132 aa14.27□□□□□ -0.13
GABRB3-202ENST00000311550 PRCDQ00LT1 54 aa14.27□□□□□ -0.13
GABRB3-202ENST00000311550 RPP21Q9H633 154 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms