RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DISC1C4P0D8 188 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 NDUFA4O00483 81 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 SCGB2B2Q4G0G5 96 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 AARDQ4LEZ3 155 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 SPINK9Q5DT21 86 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 CASC10Q5T4H9 136 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 ZFAND1Q8TCF1 268 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 GLYATL2Q8WU03 294 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 SPATA25Q9BR10 227 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 HIPK2Q9H2X6 1198 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 PALMDQ9NP74 551 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 UFC1Q9Y3C8 167 aa14.82□□□□□ -0.04
PDZRN3-202ENST00000308537 TRAV25A0A0B4J276 109 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 ANKRD20A5PA0PJZ0 165 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 ST8SIA3O43173 380 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 GSTZ1O43708 216 aaPredicted RBP14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 SCAF4O95104 1147 aaKnown RBP14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 CDS2O95674 445 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 AKAIN1P0CW23 69 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 TMEM222Q9H0R3 208 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 TUBA4BQ9H853 241 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 RETNQ9HD89 108 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 DAZ1Q9NQZ3 744 aaKnown RBP14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 COPZ2Q9P299 210 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 GPR132Q9UNW8 380 aa14.81□□□□□ -0.04
PDZRN3-202ENST00000308537 IGHV3OR16-8A0A075B7F1 116 aa14.8□□□□□ -0.04
PDZRN3-202ENST00000308537 MT-CO2P00403 227 aa14.8□□□□□ -0.04
PDZRN3-202ENST00000308537 SURF2Q15527 256 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-202ENST00000308537 CCDC71LQ8N9Z2 235 aa14.8□□□□□ -0.04
PDZRN3-202ENST00000308537 SRD5A3Q9H8P0 318 aa14.8□□□□□ -0.04
PDZRN3-202ENST00000308537 DNAH1Q9P2D7 4330 aa14.8□□□□□ -0.04
PDZRN3-202ENST00000308537 K7EMT4 169 aa14.79□□□□□ -0.04
PDZRN3-202ENST00000308537 IGHV3-48P01763 117 aa14.79□□□□□ -0.04
PDZRN3-202ENST00000308537 OR5AC1P0C628 307 aa14.79□□□□□ -0.04
PDZRN3-202ENST00000308537 AKR1C2P52895 323 aa14.79□□□□□ -0.04
PDZRN3-202ENST00000308537 SPANXN2Q5MJ10 180 aa14.79□□□□□ -0.04
PDZRN3-202ENST00000308537 UBAC2Q8NBM4 344 aa14.79□□□□□ -0.04
PDZRN3-202ENST00000308537 TMEM230Q96A57 120 aa14.79□□□□□ -0.04
PDZRN3-202ENST00000308537 NAA60Q9H7X0 242 aa14.79□□□□□ -0.04
PDZRN3-202ENST00000308537 B3GALNT1O75752 331 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 RNASE2P10153 161 aaKnown RBP14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 FAUP35544 74 aaKnown RBP14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 AP3S2P59780 193 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 BSXQ3C1V8 233 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 PYDC2Q56P42 97 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 Q56UQ5 140 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 OR51S1Q8NGJ8 323 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 MISP3Q96FF7 219 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 OR10C1Q96KK4 312 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 TXN2Q99757 166 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 PRRT1Q99946 306 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 RYR2Q92736 4967 aa14.78□□□□□ -0.04
PDZRN3-202ENST00000308537 CRYM-AS1A6NIL9 109 aa14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 C15orf62A8K5M9 175 aa14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 TSPAN4O14817 238 aa14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 ATG12O94817 140 aa14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 ETV6P41212 452 aa14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 TRIM16LQ309B1 348 aa14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 SELENOHQ8IZQ5 122 aaKnown RBP14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 OR52B4Q8NGK2 314 aa14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 SCGB3A2Q96PL1 93 aa14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 MRPL36Q9P0J6 103 aaKnown RBP14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 SCP2D1Q9UJQ7 156 aa14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 C14orf166Q9Y224 244 aaKnown RBP14.77□□□□□ -0.05
PDZRN3-202ENST00000308537 TEX13DA0A0J9YY54 714 aaPredicted RBP14.76□□□□□ -0.05
PDZRN3-202ENST00000308537 ZNF207O43670 478 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-202ENST00000308537 MFAP4P55083 255 aa14.76□□□□□ -0.05
PDZRN3-202ENST00000308537 ERHP84090 104 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-202ENST00000308537 SLC16A13Q7RTY0 426 aa14.76□□□□□ -0.05
PDZRN3-202ENST00000308537 TRIM63Q969Q1 353 aa14.76□□□□□ -0.05
PDZRN3-202ENST00000308537 SPAG8Q99932 426 aaPredicted RBP14.76□□□□□ -0.05
PDZRN3-202ENST00000308537 FNDC4Q9H6D8 234 aaPredicted RBP14.76□□□□□ -0.05
PDZRN3-202ENST00000308537 V9GYH0 126 aa14.76□□□□□ -0.05
PDZRN3-202ENST00000308537 ODF3L2Q3SX64 289 aa14.75□□□□□ -0.05
PDZRN3-202ENST00000308537 RBPMSQ93062 196 aaKnown RBP14.75□□□□□ -0.05
PDZRN3-202ENST00000308537 FAM110AQ9BQ89 295 aa14.75□□□□□ -0.05
PDZRN3-202ENST00000308537 C20orf24Q9BUV8 137 aa14.75□□□□□ -0.05
PDZRN3-202ENST00000308537 GAR1Q9NY12 217 aaKnown RBP14.75□□□□□ -0.05
PDZRN3-202ENST00000308537 SMPXQ9UHP9 88 aa14.75□□□□□ -0.05
PDZRN3-202ENST00000308537 TMEM56-RWDD3S4R434 201 aa14.75□□□□□ -0.05
PDZRN3-202ENST00000308537 SUPT4H1P63272 117 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-202ENST00000308537 RBPMS2Q6ZRY4 209 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-202ENST00000308537 FAM219AQ8IW50 185 aa14.74□□□□□ -0.05
PDZRN3-202ENST00000308537 SLC35G3Q8N808 338 aa14.74□□□□□ -0.05
PDZRN3-202ENST00000308537 DEDD2Q8WXF8 326 aa14.74□□□□□ -0.05
PDZRN3-202ENST00000308537 PINX1Q96BK5 328 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-202ENST00000308537 GPR146Q96CH1 333 aa14.74□□□□□ -0.05
PDZRN3-202ENST00000308537 GALNT14Q96FL9 552 aa14.74□□□□□ -0.05
PDZRN3-202ENST00000308537 MCUBQ9NWR8 336 aa14.74□□□□□ -0.05
PDZRN3-202ENST00000308537 IGHV7-4-1A0A0J9YVY3 117 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 CHEK1O14757 476 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 NUPL2O15504 423 aaKnown RBP14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 IFNA17P01571 189 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 KLF9Q13886 244 aaPredicted RBP14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 TMEM187Q14656 261 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 ZNF79Q15937 498 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 MLANAQ16655 118 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 ANKRD55Q3KP44 614 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 FAM90A2PQ658T7 463 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 CCDC190Q86UF4 302 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms