RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ZNF343Q6P1L6 599 aa18.94■□□□□ 0.62
HOXC9-201ENST00000303450 OR11H1Q8NG94 326 aa18.94■□□□□ 0.62
HOXC9-201ENST00000303450 EEF1AKMT3Q96AZ1 226 aa18.94■□□□□ 0.62
HOXC9-201ENST00000303450 RAX2Q96IS3 184 aa18.94■□□□□ 0.62
HOXC9-201ENST00000303450 S4R3C0 116 aa18.94■□□□□ 0.62
HOXC9-201ENST00000303450 WNK1Q9H4A3 2382 aa18.93■□□□□ 0.62
HOXC9-201ENST00000303450 ANKRD34BA5PLL1 514 aa18.93■□□□□ 0.62
HOXC9-201ENST00000303450 PF4P02776 101 aa18.93■□□□□ 0.62
HOXC9-201ENST00000303450 NPY1RP25929 384 aa18.93■□□□□ 0.62
HOXC9-201ENST00000303450 C2orf83Q53S99 150 aa18.93■□□□□ 0.62
HOXC9-201ENST00000303450 NOXA1Q86UR1 476 aa18.93■□□□□ 0.62
HOXC9-201ENST00000303450 PINX1Q96BK5 328 aaKnown RBP18.93■□□□□ 0.62
HOXC9-201ENST00000303450 DUX3Q96PT4 197 aa18.93■□□□□ 0.62
HOXC9-201ENST00000303450 MGAT4CQ9UBM8 478 aa18.93■□□□□ 0.62
HOXC9-201ENST00000303450 DNHD1Q96M86 4753 aa18.93■□□□□ 0.62
HOXC9-201ENST00000303450 IGHV3-21A0A0B4J1V1 117 aa18.92■□□□□ 0.62
HOXC9-201ENST00000303450 MFSD2BA6NFX1 497 aa18.92■□□□□ 0.62
HOXC9-201ENST00000303450 CCL24O00175 119 aa18.92■□□□□ 0.62
HOXC9-201ENST00000303450 CORTO00230 105 aa18.92■□□□□ 0.62
HOXC9-201ENST00000303450 SSSCA1O60232 199 aa18.92■□□□□ 0.62
HOXC9-201ENST00000303450 LY86O95711 162 aa18.92■□□□□ 0.62
HOXC9-201ENST00000303450 MBPP02686 304 aaPredicted RBP18.92■□□□□ 0.62
HOXC9-201ENST00000303450 OR1N2Q8NGR9 330 aa18.92■□□□□ 0.62
HOXC9-201ENST00000303450 VN1R17PQ8TDU5 208 aa18.92■□□□□ 0.62
HOXC9-201ENST00000303450 DPF1Q92782 380 aa18.92■□□□□ 0.62
HOXC9-201ENST00000303450 IGHV3-23P01764 117 aa18.91■□□□□ 0.62
HOXC9-201ENST00000303450 MYCNOSP40205 109 aa18.91■□□□□ 0.62
HOXC9-201ENST00000303450 MED28Q9H204 178 aa18.91■□□□□ 0.62
HOXC9-201ENST00000303450 PEF1Q9UBV8 284 aaKnown RBP18.91■□□□□ 0.62
HOXC9-201ENST00000303450 TRBV7-1A0A0A6YYK4 115 aa18.9■□□□□ 0.62
HOXC9-201ENST00000303450 K7EIM0 57 aa18.9■□□□□ 0.62
HOXC9-201ENST00000303450 MT-CO2P00403 227 aa18.9■□□□□ 0.62
HOXC9-201ENST00000303450 HSPB1P04792 205 aaKnown RBP18.9■□□□□ 0.62
HOXC9-201ENST00000303450 ATP5IP56385 69 aaPredicted RBP18.9■□□□□ 0.62
HOXC9-201ENST00000303450 RPP30P78346 268 aaKnown RBP18.9■□□□□ 0.62
HOXC9-201ENST00000303450 ZNF616Q08AN1 781 aa18.9■□□□□ 0.62
HOXC9-201ENST00000303450 FAM209BQ5JX69 171 aa18.9■□□□□ 0.62
HOXC9-201ENST00000303450 PVRIGQ6DKI7 326 aa18.9■□□□□ 0.62
HOXC9-201ENST00000303450 SCARB1Q8WTV0 552 aa18.9■□□□□ 0.62
HOXC9-201ENST00000303450 RANGRFQ9HD47 186 aaPredicted RBP18.9■□□□□ 0.62
HOXC9-201ENST00000303450 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.9■□□□□ 0.62
HOXC9-201ENST00000303450 I3L2K1 104 aa18.9■□□□□ 0.62
HOXC9-201ENST00000303450 ETV3LQ6ZN32 361 aa18.9■□□□□ 0.62
HOXC9-201ENST00000303450 LSM5Q9Y4Y9 91 aaKnown RBP18.9■□□□□ 0.62
HOXC9-201ENST00000303450 IGHV4OR15-8A0A075B7B6 117 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 A0A087WW49 117 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 OPRK1P41145 380 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 H2BFSP57053 126 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 CYCSP99999 105 aaKnown RBP18.89■□□□□ 0.61
HOXC9-201ENST00000303450 CLEC19AQ6UXS0 136 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 ZNF502Q8TBZ5 544 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 TMEM170AQ8WVE7 144 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 RAB40CQ96S21 281 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 NMES1Q9C002 83 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 C21orf62Q9NYP8 219 aa18.89■□□□□ 0.61
HOXC9-201ENST00000303450 PAIP2BQ9ULR5 123 aaKnown RBP18.89■□□□□ 0.61
HOXC9-201ENST00000303450 RCL1Q9Y2P8 373 aaKnown RBP18.89■□□□□ 0.61
HOXC9-201ENST00000303450 LINC01619G3V211 115 aa18.88■□□□□ 0.61
HOXC9-201ENST00000303450 TRBV12-3P01733 135 aa18.88■□□□□ 0.61
HOXC9-201ENST00000303450 IFNA4P05014 189 aa18.88■□□□□ 0.61
HOXC9-201ENST00000303450 S100A10P60903 97 aa18.88■□□□□ 0.61
HOXC9-201ENST00000303450 RAB11AP62491 216 aa18.88■□□□□ 0.61
HOXC9-201ENST00000303450 IL15RAQ13261 267 aa18.88■□□□□ 0.61
HOXC9-201ENST00000303450 SPANXN5Q5MJ07 72 aa18.88■□□□□ 0.61
HOXC9-201ENST00000303450 RNASEH2CQ8TDP1 164 aaKnown RBP18.88■□□□□ 0.61
HOXC9-201ENST00000303450 CCDC140Q96MF4 163 aa18.88■□□□□ 0.61
HOXC9-201ENST00000303450 PSENENQ9NZ42 101 aa18.88■□□□□ 0.61
HOXC9-201ENST00000303450 H3BP45 60 aa18.87■□□□□ 0.61
HOXC9-201ENST00000303450 K7EPK0 472 aa18.87■□□□□ 0.61
HOXC9-201ENST00000303450 OR8U8P0C7N1 319 aa18.87■□□□□ 0.61
HOXC9-201ENST00000303450 FHL3Q13643 280 aa18.87■□□□□ 0.61
HOXC9-201ENST00000303450 SMIM8Q96KF7 97 aa18.87■□□□□ 0.61
HOXC9-201ENST00000303450 VWFP04275 2813 aa18.86■□□□□ 0.61
HOXC9-201ENST00000303450 L7N2F9 121 aa18.86■□□□□ 0.61
HOXC9-201ENST00000303450 IGHV3-48P01763 117 aa18.86■□□□□ 0.61
HOXC9-201ENST00000303450 CLEC3BP05452 202 aa18.86■□□□□ 0.61
HOXC9-201ENST00000303450 VAMP2P63027 116 aa18.86■□□□□ 0.61
HOXC9-201ENST00000303450 RAB32Q13637 225 aa18.86■□□□□ 0.61
HOXC9-201ENST00000303450 PRR31Q5SQ13 230 aa18.86■□□□□ 0.61
HOXC9-201ENST00000303450 UBAC2Q8NBM4 344 aa18.86■□□□□ 0.61
HOXC9-201ENST00000303450 STRAPQ9Y3F4 350 aaKnown RBP18.86■□□□□ 0.61
HOXC9-201ENST00000303450 RPS10-NUDT3A0A1W2PQS6 291 aa18.85■□□□□ 0.61
HOXC9-201ENST00000303450 C15orf62A8K5M9 175 aa18.85■□□□□ 0.61
HOXC9-201ENST00000303450 MFAP4P55083 255 aa18.85■□□□□ 0.61
HOXC9-201ENST00000303450 FCN2Q15485 313 aa18.85■□□□□ 0.61
HOXC9-201ENST00000303450 Q56UQ5 140 aa18.85■□□□□ 0.61
HOXC9-201ENST00000303450 OR4C12Q96R67 309 aa18.85■□□□□ 0.61
HOXC9-201ENST00000303450 PPP5D1E7EU14 171 aa18.84■□□□□ 0.61
HOXC9-201ENST00000303450 TMEM50AO95807 157 aa18.84■□□□□ 0.61
HOXC9-201ENST00000303450 CXCL3P19876 107 aa18.84■□□□□ 0.61
HOXC9-201ENST00000303450 PVALBP20472 110 aaPredicted RBP18.84■□□□□ 0.61
HOXC9-201ENST00000303450 ZP3P21754 424 aa18.84■□□□□ 0.61
HOXC9-201ENST00000303450 GPR183P32249 361 aa18.84■□□□□ 0.61
HOXC9-201ENST00000303450 ARL3P36405 182 aa18.84■□□□□ 0.61
HOXC9-201ENST00000303450 TAS2R30P59541 319 aa18.84■□□□□ 0.61
HOXC9-201ENST00000303450 FNDC4Q9H6D8 234 aaPredicted RBP18.84■□□□□ 0.61
HOXC9-201ENST00000303450 HOXD3P31249 432 aaPredicted RBP18.84■□□□□ 0.61
HOXC9-201ENST00000303450 SLURP1P55000 103 aa18.84■□□□□ 0.61
HOXC9-201ENST00000303450 PAX9P55771 341 aa18.84■□□□□ 0.61
HOXC9-201ENST00000303450 RRAS2P62070 204 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms