RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 ATF4P18848 351 aaPredicted RBP12.86□□□□□ -0.35
TFF3-201ENST00000291525 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
TFF3-201ENST00000291525 PMS2P11Q13670 270 aa12.86□□□□□ -0.35
TFF3-201ENST00000291525 SLC35G3Q8N808 338 aa12.86□□□□□ -0.35
TFF3-201ENST00000291525 RNF183Q96D59 192 aa12.86□□□□□ -0.35
TFF3-201ENST00000291525 PDCD10Q9BUL8 212 aa12.86□□□□□ -0.35
TFF3-201ENST00000291525 M0QYG6 137 aa12.85□□□□□ -0.35
TFF3-201ENST00000291525 TBPP20226 339 aa12.85□□□□□ -0.35
TFF3-201ENST00000291525 SNCAP37840 140 aa12.85□□□□□ -0.35
TFF3-201ENST00000291525 NPBWR1P48145 328 aa12.85□□□□□ -0.35
TFF3-201ENST00000291525 AKR1C2P52895 323 aa12.85□□□□□ -0.35
TFF3-201ENST00000291525 ARRDC1Q8N5I2 433 aa12.85□□□□□ -0.35
TFF3-201ENST00000291525 DUSP18Q8NEJ0 188 aa12.85□□□□□ -0.35
TFF3-201ENST00000291525 C15orf40Q8WUR7 153 aa12.85□□□□□ -0.35
TFF3-201ENST00000291525 MAP6D1Q9H9H5 199 aa12.85□□□□□ -0.35
TFF3-201ENST00000291525 CORTO00230 105 aa12.84□□□□□ -0.35
TFF3-201ENST00000291525 SCGB2A1O75556 95 aa12.84□□□□□ -0.35
TFF3-201ENST00000291525 SUB1P53999 127 aaKnown RBP eCLIP12.84□□□□□ -0.35
TFF3-201ENST00000291525 PIGPP57054 158 aa12.84□□□□□ -0.35
TFF3-201ENST00000291525 CCDC71LQ8N9Z2 235 aa12.84□□□□□ -0.35
TFF3-201ENST00000291525 LINC00476Q8WZB0 136 aa12.84□□□□□ -0.35
TFF3-201ENST00000291525 KLK5Q9Y337 293 aaPredicted RBP12.84□□□□□ -0.35
TFF3-201ENST00000291525 IFNA17P01571 189 aa12.83□□□□□ -0.36
TFF3-201ENST00000291525 TFPI2P48307 235 aa12.83□□□□□ -0.36
TFF3-201ENST00000291525 RNASE12Q5GAN4 147 aaKnown RBP12.83□□□□□ -0.36
TFF3-201ENST00000291525 LHFPL1Q86WI0 220 aa12.83□□□□□ -0.36
TFF3-201ENST00000291525 ZFAND1Q8TCF1 268 aa12.83□□□□□ -0.36
TFF3-201ENST00000291525 TMEM231Q9H6L2 316 aa12.83□□□□□ -0.36
TFF3-201ENST00000291525 ENY2Q9NPA8 101 aa12.83□□□□□ -0.36
TFF3-201ENST00000291525 COPZ2Q9P299 210 aa12.83□□□□□ -0.36
TFF3-201ENST00000291525 IGHV3-49A0A0A0MS15 119 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 MPTX1A8MV57 137 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 INS-IGF2F8WCM5 200 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 B3GALNT1O75752 331 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 IGHV3-48P01763 117 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 ZNF182P17025 639 aaPredicted RBP12.82□□□□□ -0.36
TFF3-201ENST00000291525 TRIM16LQ309B1 348 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 CEMP1Q6PRD7 247 aaPredicted RBP12.82□□□□□ -0.36
TFF3-201ENST00000291525 ZNF600Q6ZNG1 722 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 APRG1Q8IVJ8 170 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 RNASE11Q8TAA1 199 aaKnown RBP12.82□□□□□ -0.36
TFF3-201ENST00000291525 GATAD1Q8WUU5 269 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 CSTL1Q9H114 145 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 EXTL2Q9UBQ6 330 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 KLK11Q9UBX7 282 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 MTFP1Q9UDX5 166 aa12.82□□□□□ -0.36
TFF3-201ENST00000291525 IGKV3-7A0A075B6H7 116 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 ST8SIA3O43173 380 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 LY6G6CO95867 125 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 IGKV1-5P01602 117 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 CD3DP04234 171 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 PI3P19957 117 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 HOXA1P49639 335 aaPredicted RBP12.81□□□□□ -0.36
TFF3-201ENST00000291525 PPP5CP53041 499 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 SPINK9Q5DT21 86 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 TCF24Q7RTU0 167 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 OR52I2Q8NH67 350 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 RRNAD1Q96FB5 475 aaKnown RBP12.81□□□□□ -0.36
TFF3-201ENST00000291525 TP53RKQ96S44 253 aa12.81□□□□□ -0.36
TFF3-201ENST00000291525 DNASE2O00115 360 aaPredicted RBP12.8□□□□□ -0.36
TFF3-201ENST00000291525 GABARAPO95166 117 aa12.8□□□□□ -0.36
TFF3-201ENST00000291525 TAS2R19P59542 299 aa12.8□□□□□ -0.36
TFF3-201ENST00000291525 IZUMO4Q1ZYL8 232 aa12.8□□□□□ -0.36
TFF3-201ENST00000291525 FAM90A2PQ658T7 463 aa12.8□□□□□ -0.36
TFF3-201ENST00000291525 TOMM20LQ6UXN7 152 aa12.8□□□□□ -0.36
TFF3-201ENST00000291525 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
TFF3-201ENST00000291525 ZNF414Q96IQ9 312 aa12.8□□□□□ -0.36
TFF3-201ENST00000291525 PUS1Q9Y606 427 aaKnown RBP eCLIP12.8□□□□□ -0.36
TFF3-201ENST00000291525 ALMS1Q8TCU4 4167 aa12.8□□□□□ -0.36
TFF3-201ENST00000291525 IGHV3OR16-13A0A075B7E8 117 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 IGHV3-74A0A0B4J1X5 117 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 TRAV2A0A0B4J234 112 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 A0A0B4J293 547 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 DFFBO76075 338 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 P0C879 139 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 EWSR1Q01844 656 aaKnown RBP eCLIP12.79□□□□□ -0.36
TFF3-201ENST00000291525 SCGB2B2Q4G0G5 96 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 TMEM229BQ8NBD8 167 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 TERB2Q8NHR7 220 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 ST8SIA2Q92186 375 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 VSIRQ9H7M9 311 aa12.79□□□□□ -0.36
TFF3-201ENST00000291525 A0A1W2PS18 150 aa12.78□□□□□ -0.36
TFF3-201ENST00000291525 RAB3DO95716 219 aa12.78□□□□□ -0.36
TFF3-201ENST00000291525 TMEM50AO95807 157 aa12.78□□□□□ -0.36
TFF3-201ENST00000291525 UCP1P25874 307 aa12.78□□□□□ -0.36
TFF3-201ENST00000291525 OPRK1P41145 380 aa12.78□□□□□ -0.36
TFF3-201ENST00000291525 RPL11P62913 178 aaKnown RBP12.78□□□□□ -0.36
TFF3-201ENST00000291525 SSBP1Q04837 148 aaKnown RBP12.78□□□□□ -0.36
TFF3-201ENST00000291525 CTF1Q16619 201 aa12.78□□□□□ -0.36
TFF3-201ENST00000291525 OR13C8Q8NGS7 320 aa12.78□□□□□ -0.36
TFF3-201ENST00000291525 NARS2Q96I59 477 aaKnown RBP12.78□□□□□ -0.36
TFF3-201ENST00000291525 RARRES2Q99969 163 aa12.78□□□□□ -0.36
TFF3-201ENST00000291525 CD74P04233 296 aa12.77□□□□□ -0.37
TFF3-201ENST00000291525 RNASE2P10153 161 aaKnown RBP12.77□□□□□ -0.37
TFF3-201ENST00000291525 ETV6P41212 452 aa12.77□□□□□ -0.37
TFF3-201ENST00000291525 MRPS10P82664 201 aaKnown RBP12.77□□□□□ -0.37
TFF3-201ENST00000291525 MEF2DQ14814 521 aa12.77□□□□□ -0.37
TFF3-201ENST00000291525 ZNF124Q15973 351 aa12.77□□□□□ -0.37
TFF3-201ENST00000291525 PVRIGQ6DKI7 326 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms