RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 DPRXA6NFQ7 191 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 C3orf79P0CE67 100 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 CD99P14209 185 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 PAX1P15863 534 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 INO80CQ6PI98 192 aaPredicted RBP13.84□□□□□ -0.19
SGPP1-201ENST00000247225 GCSAMQ8N6F7 178 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 H1FXQ92522 213 aaKnown RBP13.84□□□□□ -0.19
SGPP1-201ENST00000247225 PMCHL2Q9BQD1 86 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 TNRC6AQ8NDV7 1962 aaKnown RBP13.84□□□□□ -0.19
SGPP1-201ENST00000247225 GGTLC3B5MD39 225 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 MPDU1O75352 247 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 CSN3P07498 182 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 YPEL3P61236 119 aaPredicted RBP13.84□□□□□ -0.19
SGPP1-201ENST00000247225 SSBP2P81877 361 aaPredicted RBP13.84□□□□□ -0.19
SGPP1-201ENST00000247225 TPPP3Q9BW30 176 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 IGKV1OR2-108A0A075B7D4 117 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 DLX1P56177 255 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 VWC2Q2TAL6 325 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 PEAR1Q5VY43 1037 aaPredicted RBP13.84□□□□□ -0.19
SGPP1-201ENST00000247225 C19orf35Q6ZS72 473 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 FDCSPQ8NFU4 85 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 SLC45A2Q9UMX9 530 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 ARL2-SNX15V9GYD0 113 aa13.84□□□□□ -0.19
SGPP1-201ENST00000247225 M0R2Z0 102 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 EIF4EBP1Q13541 118 aaPredicted RBP13.83□□□□□ -0.2
SGPP1-201ENST00000247225 LEMD1Q68G75 181 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 Q6ZT83 130 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 IGHV2OR16-5A0A0B4J2B6 119 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 SRRM4A7MD48 611 aaKnown RBP13.83□□□□□ -0.2
SGPP1-201ENST00000247225 CORTO00230 105 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 MGST3O14880 152 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 RPL19P84098 196 aaKnown RBP13.83□□□□□ -0.2
SGPP1-201ENST00000247225 SLAQ13239 276 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 COL5A1-AS1Q5SY13 56 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 HCP5Q6MZN7 132 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 WDR31Q8NA23 367 aa13.83□□□□□ -0.2
SGPP1-201ENST00000247225 KIR2DL2P43627 348 aaPredicted RBP13.82□□□□□ -0.2
SGPP1-201ENST00000247225 COMMD5Q9GZQ3 224 aa13.82□□□□□ -0.2
SGPP1-201ENST00000247225 CDC42EP3Q9UKI2 254 aa13.82□□□□□ -0.2
SGPP1-201ENST00000247225 ZGRF1Q86YA3 2104 aa13.82□□□□□ -0.2
SGPP1-201ENST00000247225 IGHV1-18A0A0C4DH31 117 aa13.82□□□□□ -0.2
SGPP1-201ENST00000247225 TNXAQ16473 311 aa13.82□□□□□ -0.2
SGPP1-201ENST00000247225 TCF24Q7RTU0 167 aa13.82□□□□□ -0.2
SGPP1-201ENST00000247225 RBMXL3Q8N7X1 1067 aaKnown RBP13.82□□□□□ -0.2
SGPP1-201ENST00000247225 RBM14Q96PK6 669 aaKnown RBP13.82□□□□□ -0.2
SGPP1-201ENST00000247225 IDI2-AS1Q9NZ38 188 aa13.82□□□□□ -0.2
SGPP1-201ENST00000247225 TRGV10A0A0A0MS01 117 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 C15orf61A6NNL5 157 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 BMPR1BO00238 502 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 SNAI2O43623 268 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 COX7A2P2O60397 106 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 LINC00869P0C866 280 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 ACP1P24666 158 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 STUMQ69YW2 141 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 RPRMLQ8N4K4 120 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 KIR3DL3Q8N743 410 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 OR5B3Q8NH48 314 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 NPIPB3Q92617 1050 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 MOSP00540 346 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 ZNF138P52744 262 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 MDS2Q8NDY4 140 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 RAB1CQ92928 201 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 HES4Q9HCC6 221 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 CSMD1Q96PZ7 3565 aa13.81□□□□□ -0.2
SGPP1-201ENST00000247225 M0QZK8 103 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 C20orf202A1L168 122 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 TEX43Q6ZNM6 134 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 SLC35E1Q96K37 410 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 ZPBPQ9BS86 351 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 CLEC7AQ9BXN2 247 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 MALRD1Q5VYJ5 2156 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 CCL3L1P16619 93 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 TMEM136Q6ZRR5 245 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 RNF2Q99496 336 aa13.8□□□□□ -0.2
SGPP1-201ENST00000247225 ZNF324O75467 553 aaPredicted RBP13.79□□□□□ -0.2
SGPP1-201ENST00000247225 OR52E5Q8NH55 327 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 HARBI1Q96MB7 349 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 JPT1Q9UK76 154 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 PROCRQ9UNN8 238 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 ZNF835Q9Y2P0 537 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 AMMECR1Q9Y4X0 333 aaPredicted RBP13.79□□□□□ -0.2
SGPP1-201ENST00000247225 HYPMO75409 117 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 LOXL3P58215 753 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 OR1B1Q8NGR6 318 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 TSKUQ8WUA8 353 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 GSX1Q9H4S2 264 aaPredicted RBP13.79□□□□□ -0.2
SGPP1-201ENST00000247225 TMEM167BQ9NRX6 74 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 LAMTOR2Q9Y2Q5 125 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 DSCAMO60469 2012 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 VAMP3Q15836 100 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 DEFB109BQ30KR1 87 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 C1orf174Q8IYL3 243 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 OR8B2Q96RD0 313 aa13.79□□□□□ -0.2
SGPP1-201ENST00000247225 SLC25A5P05141 298 aaKnown RBP13.78□□□□□ -0.2
SGPP1-201ENST00000247225 TAS2R45P59539 299 aa13.78□□□□□ -0.2
SGPP1-201ENST00000247225 KCNS1Q96KK3 526 aa13.78□□□□□ -0.2
SGPP1-201ENST00000247225 LSM4Q9Y4Z0 139 aaKnown RBP13.78□□□□□ -0.2
SGPP1-201ENST00000247225 TNRC18O15417 2968 aaPredicted RBP13.78□□□□□ -0.2
SGPP1-201ENST00000247225 ISLRO14498 428 aa13.78□□□□□ -0.2
SGPP1-201ENST00000247225 UBE2G1P62253 170 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms