RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 TMEM37Q8WXS4 190 aa17.08■□□□□ 0.33
CCDC130-201ENST00000221554 TNFRSF14Q92956 283 aa17.08■□□□□ 0.33
CCDC130-201ENST00000221554 ST6GALNAC6Q969X2 333 aa17.08■□□□□ 0.33
CCDC130-201ENST00000221554 TRBV23-1A0A0A0MS06 115 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 A0A1W2PRE2 83 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 C8orf88P0DMB2 117 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 LGALS7P47929 136 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 CNN1P51911 297 aaKnown RBP17.07■□□□□ 0.32
CCDC130-201ENST00000221554 ZNF114Q8NC26 417 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 IL36BQ9NZH7 164 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 GCGP01275 180 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 APOBEC3AP31941 199 aaPredicted RBP17.07■□□□□ 0.32
CCDC130-201ENST00000221554 YPEL3P61236 119 aaPredicted RBP17.07■□□□□ 0.32
CCDC130-201ENST00000221554 JOSD1Q15040 202 aaPredicted RBP17.07■□□□□ 0.32
CCDC130-201ENST00000221554 TBR1Q16650 682 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 CLEC12BQ2HXU8 276 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 SPACA3Q8IXA5 215 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 OR1L4Q8NGR5 311 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 TMEM18Q96B42 140 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 WFIKKN1Q96NZ8 548 aa17.07■□□□□ 0.32
CCDC130-201ENST00000221554 PRRC2CQ9Y520 2896 aaKnown RBP17.07■□□□□ 0.32
CCDC130-201ENST00000221554 HELTA6NFD8 242 aa17.06■□□□□ 0.32
CCDC130-201ENST00000221554 B9A039 149 aa17.06■□□□□ 0.32
CCDC130-201ENST00000221554 CHRNB4P30926 498 aa17.06■□□□□ 0.32
CCDC130-201ENST00000221554 TMEM155Q4W5P6 130 aa17.06■□□□□ 0.32
CCDC130-201ENST00000221554 TGIF2LXQ8IUE1 241 aa17.06■□□□□ 0.32
CCDC130-201ENST00000221554 ZCCHC24Q8N2G6 241 aaKnown RBP17.06■□□□□ 0.32
CCDC130-201ENST00000221554 EAF1Q96JC9 268 aaPredicted RBP17.06■□□□□ 0.32
CCDC130-201ENST00000221554 VKORC1Q9BQB6 163 aa17.06■□□□□ 0.32
CCDC130-201ENST00000221554 IGKV1OR2-108A0A075B7D4 117 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 SHISA9B4DS77 424 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 ACTL6BO94805 426 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 FSTL3O95633 263 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 AMBPP02760 352 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 OR10J4P0C629 311 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 LOXP28300 417 aaPredicted RBP17.05■□□□□ 0.32
CCDC130-201ENST00000221554 DLX6P56179 175 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 SELENOTP62341 195 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 SLC25A33Q9BSK2 321 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 ZNRD1Q9P1U0 126 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 GATCO43716 136 aaKnown RBP17.05■□□□□ 0.32
CCDC130-201ENST00000221554 ETFRF1Q6IPR1 90 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 LYPD2Q6UXB3 125 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 DNAJC4Q9NNZ3 241 aa17.05■□□□□ 0.32
CCDC130-201ENST00000221554 AURKAIP1Q9NWT8 199 aaPredicted RBP17.05■□□□□ 0.32
CCDC130-201ENST00000221554 OR7C2O60412 319 aa17.04■□□□□ 0.32
CCDC130-201ENST00000221554 GNG4P50150 75 aa17.04■□□□□ 0.32
CCDC130-201ENST00000221554 PKIAP61925 76 aa17.04■□□□□ 0.32
CCDC130-201ENST00000221554 ZNF90Q03938 601 aa17.04■□□□□ 0.32
CCDC130-201ENST00000221554 OR10W1Q8NGF6 305 aa17.04■□□□□ 0.32
CCDC130-201ENST00000221554 SH3BGRL2Q9UJC5 107 aa17.04■□□□□ 0.32
CCDC130-201ENST00000221554 CACNA1BQ00975 2339 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 TRAV20A0A0B4J274 112 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 IGHV1-69-2A0A0G2JMI3 117 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 PGPEP1LA6NFU8 196 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 E7EQL1 145 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 K7ENP7 123 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 FCN3O75636 299 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 CD3EP07766 207 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 COX19Q49B96 90 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 PRDM13Q9H4Q3 707 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 ATRXP46100 2492 aa17.03■□□□□ 0.32
CCDC130-201ENST00000221554 TRBV9A0A0B4J1U6 114 aa17.02■□□□□ 0.32
CCDC130-201ENST00000221554 TSTD3H0UI37 97 aa17.02■□□□□ 0.32
CCDC130-201ENST00000221554 IGLV2-23P01705 113 aa17.02■□□□□ 0.32
CCDC130-201ENST00000221554 IGHV1-8P0DP01 117 aa17.02■□□□□ 0.32
CCDC130-201ENST00000221554 PRRX1P54821 245 aa17.02■□□□□ 0.32
CCDC130-201ENST00000221554 TIGITQ495A1 244 aa17.02■□□□□ 0.32
CCDC130-201ENST00000221554 TEX45Q8NA69 505 aa17.02■□□□□ 0.32
CCDC130-201ENST00000221554 ZNF430Q9H8G1 570 aaPredicted RBP17.02■□□□□ 0.32
CCDC130-201ENST00000221554 CTSZQ9UBR2 303 aa17.02■□□□□ 0.32
CCDC130-201ENST00000221554 YLPM1P49750 1951 aaKnown RBP17.02■□□□□ 0.32
CCDC130-201ENST00000221554 BPIFB3P59826 476 aa17.02■□□□□ 0.31
CCDC130-201ENST00000221554 RPEL1Q2QD12 228 aa17.02■□□□□ 0.31
CCDC130-201ENST00000221554 THAP8Q8NA92 274 aa17.02■□□□□ 0.31
CCDC130-201ENST00000221554 TMEM133Q9H2Q1 129 aa17.02■□□□□ 0.31
CCDC130-201ENST00000221554 REG1BP48304 166 aa17.01■□□□□ 0.31
CCDC130-201ENST00000221554 MOB3BQ86TA1 216 aa17.01■□□□□ 0.31
CCDC130-201ENST00000221554 DMRTC2Q8IXT2 367 aaPredicted RBP17.01■□□□□ 0.31
CCDC130-201ENST00000221554 OSTCQ9NRP0 149 aa17.01■□□□□ 0.31
CCDC130-201ENST00000221554 TLN1Q9Y490 2541 aaKnown RBP17■□□□□ 0.31
CCDC130-201ENST00000221554 TCRBV4S1A1TA0A5B7 111 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 K7EN84 100 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 CASP6P55212 293 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 ERVFC1-1P60608 527 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 LURAP1LQ8IV03 231 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 ZNF503Q96F45 646 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 ZFYVE26Q68DK2 2539 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 PSMB11A5LHX3 300 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 COX7A2P2O60397 106 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 RBP4P02753 201 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 CRYBB3P26998 211 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 PPOXP50336 477 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 TAS2R60P59551 318 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 MMD2Q8IY49 270 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 GBGT1Q8N5D6 347 aa17■□□□□ 0.31
CCDC130-201ENST00000221554 RALYQ9UKM9 306 aaKnown RBP17■□□□□ 0.31
CCDC130-201ENST00000221554 LGALS4P56470 323 aa16.99■□□□□ 0.31
CCDC130-201ENST00000221554 DEFA6Q01524 100 aa16.99■□□□□ 0.31
CCDC130-201ENST00000221554 WT1-ASQ06250 92 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms