RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 IFI27L2Q9H2X8 130 aa8.78□□□□□ -1
VCL-201ENST00000211998 EDA2RQ9HAV5 297 aa8.78□□□□□ -1
VCL-201ENST00000211998 EPDR1Q9UM22 224 aa8.78□□□□□ -1
VCL-201ENST00000211998 SYNGR3O43761 229 aa8.78□□□□□ -1
VCL-201ENST00000211998 COX6A1P12074 109 aa8.78□□□□□ -1
VCL-201ENST00000211998 SUPT4H1P63272 117 aaKnown RBP8.78□□□□□ -1
VCL-201ENST00000211998 SCARF2Q96GP6 870 aaPredicted RBP8.78□□□□□ -1
VCL-201ENST00000211998 AGMATQ9BSE5 352 aa8.78□□□□□ -1
VCL-201ENST00000211998 CALYQ9NYX4 217 aa8.78□□□□□ -1
VCL-201ENST00000211998 ZNF815PA8K554 130 aa8.78□□□□□ -1
VCL-201ENST00000211998 SLC25A53Q5H9E4 307 aa8.78□□□□□ -1
VCL-201ENST00000211998 BMPERQ8N8U9 685 aa8.78□□□□□ -1
VCL-201ENST00000211998 DLX4Q92988 240 aaPredicted RBP8.78□□□□□ -1
VCL-201ENST00000211998 ZNF638Q14966 1978 aaKnown RBP8.78□□□□□ -1
VCL-201ENST00000211998 SYS1-DBNDD2H3BUS1 97 aa8.77□□□□□ -1
VCL-201ENST00000211998 SMIM10L1P0DMW3 83 aa8.77□□□□□ -1
VCL-201ENST00000211998 PRR31Q5SQ13 230 aa8.77□□□□□ -1
VCL-201ENST00000211998 FAM74A4Q5TZK3 123 aa8.77□□□□□ -1
VCL-201ENST00000211998 EBLN2Q6P2I7 272 aa8.77□□□□□ -1
VCL-201ENST00000211998 SMIM10Q96HG1 83 aa8.77□□□□□ -1
VCL-201ENST00000211998 PIMREGQ9BSJ6 248 aa8.77□□□□□ -1
VCL-201ENST00000211998 PRDM14Q9GZV8 571 aa8.77□□□□□ -1
VCL-201ENST00000211998 JPT1Q9UK76 154 aa8.77□□□□□ -1
VCL-201ENST00000211998 LSM4Q9Y4Z0 139 aaKnown RBP8.77□□□□□ -1
VCL-201ENST00000211998 KLF2Q9Y5W3 355 aaPredicted RBP8.77□□□□□ -1
VCL-201ENST00000211998 K7EP13 123 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 ATP5IP56385 69 aaPredicted RBP8.77□□□□□ -1.01
VCL-201ENST00000211998 GTSCR1Q86UQ5 136 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 TSKUQ8WUA8 353 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 IDI2-AS1Q9NZ38 188 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 A0A1B0GUS0 222 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 PRR32B1ATL7 298 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 TMEM238C9JI98 176 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 IGLV3-21P80748 117 aaPredicted RBP8.77□□□□□ -1.01
VCL-201ENST00000211998 PAQR4Q8N4S7 273 aaPredicted RBP8.77□□□□□ -1.01
VCL-201ENST00000211998 STRCP1A6NGW2 1772 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 RTN4RL2Q86UN3 420 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 METTL26Q96S19 204 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 RNF115Q9Y4L5 304 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 PTPRZ1P23471 2315 aaPredicted RBP8.77□□□□□ -1.01
VCL-201ENST00000211998 KNTC1P50748 2209 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 RPL39P5Q59GN2 51 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 MESP1Q9BRJ9 268 aa8.77□□□□□ -1.01
VCL-201ENST00000211998 IGKV1D-13A0A0B4J2D9 117 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 NPIPB13A6NJU9 1138 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 NPIPB4C9JG80 1138 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 TNFRSF6BO95407 300 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 IGKV1-13P0DP09 117 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 SRSF6Q13247 344 aaKnown RBP8.76□□□□□ -1.01
VCL-201ENST00000211998 ZNF56Q15929 161 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 ATP5L2Q7Z4Y8 100 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 CIARTQ8N365 385 aaPredicted RBP8.76□□□□□ -1.01
VCL-201ENST00000211998 JMJD8Q96S16 334 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 AZU1P20160 251 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 CDPF1Q6NVV7 123 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 Q9H3A6 140 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 TRAV2A0A0B4J234 112 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 WNT9BO14905 357 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 IGLC2P0DOY2 106 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 IGLC3P0DOY3 106 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 FOXL2P58012 376 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 PCOLCEQ15113 449 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 TEX45Q8NA69 505 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 CTHRC1Q96CG8 243 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 FBLN5Q9UBX5 448 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 FBXL7Q9UJT9 491 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 IGKV1D-8A0A087WSZ0 117 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 IGKV1D-43A0A0B4J1Z2 117 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 M0R381 172 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 SUMO2P61956 95 aaKnown RBP8.76□□□□□ -1.01
VCL-201ENST00000211998 FAM90A2PQ658T7 463 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 SPANXA1Q9NS26 97 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 RP1P56715 2156 aa8.76□□□□□ -1.01
VCL-201ENST00000211998 A0A0A6YYD4 124 aa8.75□□□□□ -1.01
VCL-201ENST00000211998 UBE2L6O14933 153 aa8.75□□□□□ -1.01
VCL-201ENST00000211998 SS18L1O75177 396 aaPredicted RBP8.75□□□□□ -1.01
VCL-201ENST00000211998 MFAP4P55083 255 aa8.75□□□□□ -1.01
VCL-201ENST00000211998 HGFACQ04756 655 aa8.75□□□□□ -1.01
VCL-201ENST00000211998 MCRIP2Q9BUT9 160 aaKnown RBP8.75□□□□□ -1.01
VCL-201ENST00000211998 MRPL27Q9P0M9 148 aaKnown RBP8.75□□□□□ -1.01
VCL-201ENST00000211998 ERG28Q9UKR5 140 aa8.75□□□□□ -1.01
VCL-201ENST00000211998 CLEC7AQ9BXN2 247 aa8.75□□□□□ -1.01
VCL-201ENST00000211998 IGKV3D-11A0A0A0MRZ8 115 aa8.75□□□□□ -1.01
VCL-201ENST00000211998 IGKV3-11P04433 115 aa8.75□□□□□ -1.01
VCL-201ENST00000211998 COL11A2P13942 1736 aaPredicted RBP8.75□□□□□ -1.01
VCL-201ENST00000211998 CHTOPQ9Y3Y2 248 aaKnown RBP8.75□□□□□ -1.01
VCL-201ENST00000211998 TUBGCP6Q96RT7 1819 aa8.75□□□□□ -1.01
VCL-201ENST00000211998 A0A1W2PR77 199 aa8.74□□□□□ -1.01
VCL-201ENST00000211998 ZNF883P0CG24 379 aa8.74□□□□□ -1.01
VCL-201ENST00000211998 PTGDSP41222 190 aa8.74□□□□□ -1.01
VCL-201ENST00000211998 LHX2P50458 406 aa8.74□□□□□ -1.01
VCL-201ENST00000211998 C9orf153Q5TBE3 101 aa8.74□□□□□ -1.01
VCL-201ENST00000211998 RPP25LQ8N5L8 163 aaKnown RBP8.74□□□□□ -1.01
VCL-201ENST00000211998 CEACAM8P31997 349 aaPredicted RBP8.74□□□□□ -1.01
VCL-201ENST00000211998 EFNB3Q15768 340 aa8.74□□□□□ -1.01
VCL-201ENST00000211998 STPG4Q8N801 248 aa8.74□□□□□ -1.01
VCL-201ENST00000211998 MOB4Q9Y3A3 225 aa8.74□□□□□ -1.01
VCL-201ENST00000211998 GAGE12HA6NDE8 117 aa8.74□□□□□ -1.01
VCL-201ENST00000211998 H3BRM9 83 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms