RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CABLES2Q9BTV7 478 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 SCRT1Q9BWW7 348 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 C11orf1Q9H5F2 150 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 GFOD1Q9NXC2 390 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 OR1A1Q9P1Q5 309 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 TRAPPC2LQ9UL33 140 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 TIMM9Q9Y5J7 89 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 DNAH3Q8TD57 4116 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 ELOA3CA0A087WX78 387 aaPredicted RBP4.2□□□□□ -1.74
SHMT1-211ENST00000618902 A0A1W2PPI3 338 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 A6NJY4 79 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 M0R036 132 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 AP4M1O00189 453 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 SPINT2O43291 252 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 PROP1O75360 226 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 SCGB1D2O95969 90 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 FAM106CPP0CH98 169 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 CD24P25063 80 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 IL3RAP26951 378 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 NPBWR1P48145 328 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 AKR1D1P51857 326 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 FXYD4P59646 89 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 B2MP61769 119 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 HLA-DRB3P79483 266 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 HTD2P86397 168 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 HLA-DRB5Q30154 266 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 MORN2Q502X0 79 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 IGSF11Q5DX21 431 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 NMSQ5H8A3 153 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 TPTE2P1Q5T6R2 138 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 TMEM88Q6PEY1 159 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 TBC1D26Q86UD7 250 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 FOXRED2Q8IWF2 684 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 ODF3L1Q8IXM7 274 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 PRR18Q8N4B5 295 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 LINC00311Q8N616 119 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 OR8U1Q8NH10 309 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 SECTM1Q8WVN6 248 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 WFDC12Q8WWY7 111 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 ST6GALNAC6Q969X2 333 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 HIST1H2BAQ96A08 127 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 C12orf57Q99622 126 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 ATP5SQ99766 215 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 CITED1Q99966 193 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 PRSS22Q9GZN4 317 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 TNFRSF19Q9NS68 423 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 LIN7CQ9NUP9 197 aaKnown RBP4.2□□□□□ -1.74
SHMT1-211ENST00000618902 KCNIP1Q9NZI2 227 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 C1RLQ9NZP8 487 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 ZMAT5Q9UDW3 170 aaKnown RBP4.2□□□□□ -1.74
SHMT1-211ENST00000618902 RCL1Q9Y2P8 373 aaKnown RBP4.2□□□□□ -1.74
SHMT1-211ENST00000618902 FBXO7Q9Y3I1 522 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 RNF114Q9Y508 228 aa4.2□□□□□ -1.74
SHMT1-211ENST00000618902 PRKDCP78527 4128 aaKnown RBP4.2□□□□□ -1.74
SHMT1-211ENST00000618902 A6NDX4 124 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 FAM90A9PA6NNJ1 464 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 SEC14L6B5MCN3 397 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 BUB1B-PAK6H3BSN5 160 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 ITGB1BP1O14713 200 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 ST8SIA5O15466 376 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 SYNGR2O43760 224 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 CHST1O43916 411 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 YPEL1O60688 119 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 OR2C1O95371 312 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 OPN1MWP04001 364 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 OPN1MW2P0DN77 364 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 OPN1MW3P0DN78 364 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 ATP6V0CP27449 155 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 CDX1P47902 265 aaPredicted RBP4.19□□□□□ -1.74
SHMT1-211ENST00000618902 REG1BP48304 166 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF137PP52743 207 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 AKR1C2P52895 323 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 ATP5IP56385 69 aaPredicted RBP4.19□□□□□ -1.74
SHMT1-211ENST00000618902 PROK1P58294 105 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 LINC00205P59089 165 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 UBE2KP61086 200 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 SRSF3P84103 164 aaKnown RBP4.19□□□□□ -1.74
SHMT1-211ENST00000618902 RELBQ01201 579 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 NHLH2Q02577 135 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 AKR1C1Q04828 323 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 CATR1Q13166 79 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 HABP2Q14520 560 aaPredicted RBP4.19□□□□□ -1.74
SHMT1-211ENST00000618902 LY6EQ16553 131 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 SP6Q3SY56 376 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 PHLDA2Q53GA4 152 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 FAM71F2Q6NXP2 309 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 SLC25A48Q6ZT89 311 aaKnown RBP4.19□□□□□ -1.74
SHMT1-211ENST00000618902 CBLN2Q8IUK8 224 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 OR5C1Q8NGR4 320 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 LINC01006Q8NI28 216 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 FAM213BQ8TBF2 198 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 CFHR4Q92496 578 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 YPEL2Q96QA6 119 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 TP53RKQ96S44 253 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 AGMATQ9BSE5 352 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 GGACTQ9BVM4 153 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 IFI27L2Q9H2X8 130 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 OR51M1Q9H341 326 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 GNG12Q9UBI6 72 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF580Q9UK33 172 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms