RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 SPANXB1Q9NS25 103 aaPredicted RBP0.02□□□□□ -2.41
HDDC2-207ENST00000608532 POLR1DQ9Y2S0 133 aa0.02□□□□□ -2.41
HDDC2-207ENST00000608532 E9PCH4 1651 aa0.02□□□□□ -2.41
HDDC2-207ENST00000608532 PEAK1Q9H792 1746 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 ANKRD17O75179 2603 aaKnown RBP0.01□□□□□ -2.41
HDDC2-207ENST00000608532 DENND4CQ5VZ89 1909 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 SYNE1Q8NF91 8797 aaKnown RBP0.01□□□□□ -2.41
HDDC2-207ENST00000608532 TMEM213A2RRL7 107 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 TRPC5OSA6NMA1 111 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 NDUFS6O75380 124 aaKnown RBP0.01□□□□□ -2.41
HDDC2-207ENST00000608532 PRM2P04554 102 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 HTR1AP08908 422 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 FAM228BP0C875 321 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 CRYGAP11844 174 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 ZNF25P17030 456 aaPredicted RBP0.01□□□□□ -2.41
HDDC2-207ENST00000608532 GLT8D1Q68CQ7 371 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 TNFAIP8L2Q6P589 184 aaPredicted RBP0.01□□□□□ -2.41
HDDC2-207ENST00000608532 FUNDC1Q8IVP5 155 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 ZNF75CPQ92670 426 aaPredicted RBP0.01□□□□□ -2.41
HDDC2-207ENST00000608532 HDHD2Q9H0R4 259 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 FAM96AQ9H5X1 160 aa0.01□□□□□ -2.41
HDDC2-207ENST00000608532 TRAV1-1A0A0B4J248 108 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 CTSDP07339 412 aaPredicted RBP0□□□□□ -2.41
HDDC2-207ENST00000608532 KRTAP2-3P0C7H8 128 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 MAP2K4P45985 399 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 PDE6HQ13956 83 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 RSU1Q15404 277 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 SYCE1Q8N0S2 351 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 TMEM161BQ8NDZ6 487 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 TSKUQ8WUA8 353 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 RASSF5Q8WWW0 418 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 MED12Q93074 2177 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 SMIM19Q96E16 107 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 GINS4Q9BRT9 223 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 KRTAP2-4Q9BYR9 128 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 KRTAP2-1Q9BYU5 128 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 NDEL1Q9GZM8 345 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 CASP8AP2Q9UKL3 1982 aa0□□□□□ -2.41
HDDC2-207ENST00000608532 SNRNP200O75643 2136 aaKnown RBP-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 GOLGA6L19H0YKK7 550 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 MAP3K7CLP57077 242 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 CNBPP62633 177 aaKnown RBP-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 CAV1Q03135 178 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 SPANXN5Q5MJ07 72 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 COMMD7Q86VX2 200 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 BPIFA4PQ86YQ2 179 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 DNAJB3Q8WWF6 145 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 OPTNQ96CV9 577 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 TMEM147Q9BVK8 224 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 OR51I2Q9H344 312 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 C15orf41Q9Y2V0 281 aa-0.01□□□□□ -2.41
HDDC2-207ENST00000608532 F5H768 121 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 INE1O15225 51 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 AADACL3Q5VUY0 350 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 CST9Q5W186 159 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 DEFB128Q7Z7B8 93 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 GPR32P1Q8NGA4 272 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 KCTD7Q96MP8 289 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 ULBP3Q9BZM4 244 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 CDC42SE1Q9NRR8 79 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 PLAC8Q9NZF1 115 aa-0.02□□□□□ -2.41
HDDC2-207ENST00000608532 COL1A1P02452 1464 aaPredicted RBP-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 TRBV20OR9-2A0A075B6H5 130 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 CASQ1P31415 396 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 SSR2P43308 183 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 EFNA4P52798 201 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 HADHBP55084 474 aaKnown RBP-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 CCL20P78556 96 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 BATFQ16520 125 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 RNASE10Q5GAN6 216 aaKnown RBP-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 DPPA3Q6W0C5 159 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 OR4E2Q8NGC2 313 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 MCFD2Q8NI22 146 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 DIRAS2Q96HU8 199 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 SCGB3A1Q96QR1 104 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 SCN3AQ9NY46 2000 aa-0.03□□□□□ -2.41
HDDC2-207ENST00000608532 HECW1Q76N89 1606 aa-0.04□□□□□ -2.42
HDDC2-207ENST00000608532 IQCF5A8MTL0 148 aa-0.04□□□□□ -2.42
HDDC2-207ENST00000608532 GRK1Q15835 563 aa-0.04□□□□□ -2.42
HDDC2-207ENST00000608532 SFT2D1Q8WV19 159 aa-0.04□□□□□ -2.42
HDDC2-207ENST00000608532 CNBD2Q96M20 576 aa-0.04□□□□□ -2.42
HDDC2-207ENST00000608532 DERL1Q9BUN8 251 aa-0.04□□□□□ -2.42
HDDC2-207ENST00000608532 RASL12Q9NYN1 266 aa-0.04□□□□□ -2.42
HDDC2-207ENST00000608532 ADGRB2O60241 1585 aa-0.04□□□□□ -2.42
HDDC2-207ENST00000608532 PLXNA4Q9HCM2 1894 aa-0.04□□□□□ -2.42
HDDC2-207ENST00000608532 ALPK3Q96L96 1907 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 MEGF8Q7Z7M0 2845 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 A0A0J9YY10 115 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 A0A1B0GX78 115 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 UBL3O95164 117 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 TYMSP04818 313 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 RHOGP84095 191 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 MPV17LQ2QL34 196 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 IQCF2Q8IXL9 164 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 PFN4Q8NHR9 129 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 MAP1LC3AQ9H492 121 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 TAS2R4Q9NYW5 299 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 DOCK3Q8IZD9 2030 aa-0.05□□□□□ -2.42
HDDC2-207ENST00000608532 ZNF106Q9H2Y7 1883 aaKnown RBP-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 833 ms