RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 GNB1LQ9BYB4 327 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 LY96Q9Y6Y9 160 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 GPX1P07203 203 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 MGST1P10620 155 aaKnown RBP14.31□□□□□ -0.12
SCARF1-205ENST00000571272 PMCHP20382 165 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 MRPS11P82912 194 aaKnown RBP14.31□□□□□ -0.12
SCARF1-205ENST00000571272 SERTAD4Q9NUC0 356 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 SLC45A2Q9UMX9 530 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 TBL2Q9Y4P3 447 aaKnown RBP14.31□□□□□ -0.12
SCARF1-205ENST00000571272 J3QR06 171 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 M0QZK8 103 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 AMTP48728 403 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 CR1LQ2VPA4 569 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 SFXN3Q9BWM7 321 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 PLEKHA3Q9HB20 300 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 IGLV1-44P01699 117 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 CX3CL1P78423 397 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 TIGITQ495A1 244 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 NHLRC2Q8NBF2 726 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 DEFB108BQ8NET1 73 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 ZNRD1Q9P1U0 126 aa14.3□□□□□ -0.12
SCARF1-205ENST00000571272 GGTLC3B5MD39 225 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 CA1P00915 261 aaPredicted RBP14.29□□□□□ -0.12
SCARF1-205ENST00000571272 BRS3P32247 399 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 RAB7AP51149 207 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 ZNF83P51522 516 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 SRSF6Q13247 344 aaKnown RBP14.29□□□□□ -0.12
SCARF1-205ENST00000571272 TMEM167BQ9NRX6 74 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 DIRC3C9JPN6 131 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 NPSP0C0P6 89 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 MZT1Q08AG7 82 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 TMEM136Q6ZRR5 245 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 ZNF586Q9NXT0 402 aa14.29□□□□□ -0.12
SCARF1-205ENST00000571272 ZNF253O75346 499 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 IGKV1-16P04430 117 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 C1orf162Q8NEQ5 155 aaPredicted RBP14.28□□□□□ -0.12
SCARF1-205ENST00000571272 NRN1Q9NPD7 142 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 TECRQ9NZ01 308 aaKnown RBP14.28□□□□□ -0.12
SCARF1-205ENST00000571272 NKX2-8O15522 239 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 IGHG3P01860 377 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 SRIP30626 198 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 FDCSPQ8NFU4 85 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 OR9G1Q8NH87 305 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 ITLN1Q8WWA0 313 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 CORO2AQ92828 525 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 SLC25A10Q9UBX3 287 aaPredicted RBP14.28□□□□□ -0.12
SCARF1-205ENST00000571272 SMG1Q96Q15 3661 aaKnown RBP14.28□□□□□ -0.12
SCARF1-205ENST00000571272 ROS1P08922 2347 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 TRBV9A0A0B4J1U6 114 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 SRRM4A7MD48 611 aaKnown RBP14.28□□□□□ -0.12
SCARF1-205ENST00000571272 CDX4O14627 284 aaPredicted RBP14.28□□□□□ -0.12
SCARF1-205ENST00000571272 DLEU1O43261 78 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 CGB3P0DN86 165 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 CGB7P0DN87 165 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 TFPI2P48307 235 aa14.28□□□□□ -0.12
SCARF1-205ENST00000571272 KBTBD11-OT1A0A1B0GTJ5 212 aa14.27□□□□□ -0.12
SCARF1-205ENST00000571272 MMP23AO75900 390 aa14.27□□□□□ -0.12
SCARF1-205ENST00000571272 LINC00479Q96M42 142 aa14.27□□□□□ -0.12
SCARF1-205ENST00000571272 ZNF71Q9NQZ8 489 aaPredicted RBP14.27□□□□□ -0.12
SCARF1-205ENST00000571272 TUBG2Q9NRH3 451 aa14.27□□□□□ -0.12
SCARF1-205ENST00000571272 GOLT1BQ9Y3E0 138 aa14.27□□□□□ -0.12
SCARF1-205ENST00000571272 A0A1W2PS18 150 aa14.27□□□□□ -0.13
SCARF1-205ENST00000571272 IBA57Q5T440 356 aaKnown RBP14.27□□□□□ -0.13
SCARF1-205ENST00000571272 BHLHA15Q7RTS1 189 aaPredicted RBP14.27□□□□□ -0.13
SCARF1-205ENST00000571272 FAM19A2Q8N3H0 131 aa14.27□□□□□ -0.13
SCARF1-205ENST00000571272 Q8N976 141 aa14.27□□□□□ -0.13
SCARF1-205ENST00000571272 LPAR2Q9HBW0 351 aa14.27□□□□□ -0.13
SCARF1-205ENST00000571272 TRAV5A0A0B4J249 113 aa14.26□□□□□ -0.13
SCARF1-205ENST00000571272 WDR73Q6P4I2 378 aa14.26□□□□□ -0.13
SCARF1-205ENST00000571272 OR10W1Q8NGF6 305 aa14.26□□□□□ -0.13
SCARF1-205ENST00000571272 SSBP3Q9BWW4 388 aaPredicted RBP14.26□□□□□ -0.13
SCARF1-205ENST00000571272 OSTCQ9NRP0 149 aa14.26□□□□□ -0.13
SCARF1-205ENST00000571272 DSCAML1Q8TD84 2053 aa14.26□□□□□ -0.13
SCARF1-205ENST00000571272 M0R1B8 84 aa14.26□□□□□ -0.13
SCARF1-205ENST00000571272 IGLV2-8P01709 118 aa14.26□□□□□ -0.13
SCARF1-205ENST00000571272 RND1Q92730 232 aa14.26□□□□□ -0.13
SCARF1-205ENST00000571272 CEP250Q9BV73 2442 aa14.26□□□□□ -0.13
SCARF1-205ENST00000571272 A0A1B0GWJ7 208 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 PRR33A8MZF0 331 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 BMPR1BO00238 502 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 MORN5Q5VZ52 161 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 FAM168AQ92567 244 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 SNRNP40Q96DI7 357 aaKnown RBP14.25□□□□□ -0.13
SCARF1-205ENST00000571272 PLSCR4Q9NRQ2 329 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 PRNDQ9UKY0 176 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 PROCRQ9UNN8 238 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 PPIAL4AQ9Y536 164 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 MT-ND6P03923 174 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 RPL19P84098 196 aaKnown RBP14.25□□□□□ -0.13
SCARF1-205ENST00000571272 PRCDQ00LT1 54 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 STARD4Q96DR4 205 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 KCNS1Q96KK3 526 aa14.25□□□□□ -0.13
SCARF1-205ENST00000571272 TEX50A0A1B0GTY4 177 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 NTF3P20783 257 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 SPATA45Q537H7 98 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 RNF2Q99496 336 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 CDC42EP3Q9UKI2 254 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 SLC25A15Q9Y619 301 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 UPK2O00526 184 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 CFHR2P36980 270 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms