RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 TXNDC17Q9BRA2 123 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 C2orf88Q9BSF0 95 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 MRPL18Q9H0U6 180 aaKnown RBP5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 SLC45A2Q9UMX9 530 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 V9GYV3 84 aa5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 CNOT1A5YKK6 2376 aaKnown RBP5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 RP1L1Q8IWN7 2480 aaPredicted RBP5.65□□□□□ -1.5
LINC-ROR-201ENST00000553704 TRGV10A0A0A0MS01 117 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 J3QR06 171 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 ITGB1BP1O14713 200 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 SPINK4O60575 86 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 SERF1AO75920 110 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 OR10J4P0C629 311 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 CRYBB3P26998 211 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 CDKN1AP38936 164 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 LGALS4P56470 323 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 TAS2R60P59551 318 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 SSBP2P81877 361 aaPredicted RBP5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 TNFAIP6P98066 277 aaPredicted RBP5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 PRCDQ00LT1 54 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 FXYD3Q14802 87 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 POU2AF1Q16633 256 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 IQCJQ1A5X6 159 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 TIMM23BQ5SRD1 257 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 FAM169BQ8N8A8 192 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 OR1L6Q8NGR2 347 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 CMTM2Q8TAZ6 248 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 RNASE7Q9H1E1 156 aaKnown RBP5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 PLEKHA3Q9HB20 300 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 ENY2Q9NPA8 101 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 DMXL2Q8TDJ6 3036 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 CUL9Q8IWT3 2517 aa5.65□□□□□ -1.51
LINC-ROR-201ENST00000553704 KIR2DL5BA0A0G2JN68 375 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 KIR2DL5BA0A0G2JPC4 375 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 C9JCJ5 164 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 E7EUB6 86 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 K7EM74 188 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 UPK2O00526 184 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 SAA1P0DJI8 122 aaPredicted RBP5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 OR10J1P30954 320 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 GATA4P43694 442 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 IER3P46695 156 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 SELENOTP62341 195 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 SLC35B1P78383 322 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 USF2Q15853 346 aaPredicted RBP5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 TDRG1Q3Y452 100 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 TGIF2LXQ8IUE1 241 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 OR8I2Q8N0Y5 310 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 KIR2DL5AQ8N109 375 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 ZCCHC24Q8N2G6 241 aaKnown RBP5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 ST6GALNAC3Q8NDV1 305 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 MS4A10Q96PG2 267 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 SLC35D1Q9NTN3 355 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 RNF7Q9UBF6 113 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 NAGKQ9UJ70 344 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 TTC28Q96AY4 2481 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 TEX50A0A1B0GTY4 177 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 RNASE2P10153 161 aaKnown RBP5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 REG1BP48304 166 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 TCL1AP56279 114 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 FAM27E3Q08E93 113 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 PQLC2Q6ZP29 291 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 ZNF788Q6ZQV5 615 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 SLC25A48Q6ZT89 311 aaKnown RBP5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 MMD2Q8IY49 270 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 C1orf174Q8IYL3 243 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 ATG101Q9BSB4 218 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 SNHG12Q9BXW3 62 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 MRPL20Q9BYC9 149 aaKnown RBP5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 RPUSD1Q9UJJ7 312 aaKnown RBP5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 TP53TG5Q9Y2B4 290 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 ADGRG4Q8IZF6 3080 aa5.64□□□□□ -1.51
LINC-ROR-201ENST00000553704 TRAV5A0A0B4J249 113 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 SNURFLB1AK76 121 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 OR7C2O60412 319 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 IGLV2-8P01709 118 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 AREGP15514 252 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 CCL3L1P16619 93 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 ERVFC1-1P60608 527 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 DIAPH2-AS1Q14236 149 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 RPEL1Q2QD12 228 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 C10orf55Q5SWW7 151 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 NHLRC2Q8NBF2 726 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 UHRF2Q96PU4 802 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 TBX15Q96SF7 602 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 CHODLQ9H9P2 273 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 SLC25A10Q9UBX3 287 aaPredicted RBP5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 PRNDQ9UKY0 176 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 CEP250Q9BV73 2442 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 FCN1O00602 326 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 CEACAM4O75871 244 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 CA1P00915 261 aaPredicted RBP5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 IGHV3-48P01763 117 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 CHRNB4P30926 498 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 COMPP49747 757 aaPredicted RBP5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 GNG4P50150 75 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 CCL8P80075 99 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 RAB31Q13636 194 aa5.63□□□□□ -1.51
LINC-ROR-201ENST00000553704 C1orf194Q5T5A4 169 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms