RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CAMSAP1Q5T5Y3 1602 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 CPS1P31327 1500 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 PTPRSQ13332 1948 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 E9PCH4 1651 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 TGIF2-C20orf24A0A0A6YYL0 155 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 I3L521 148 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 KLRC4O43908 158 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 FAM228BP0C875 321 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 DEFA4P12838 97 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 RAB13P51153 203 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 TPI1P60174 286 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 AP1S1P61966 158 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 PMAIP1Q13794 54 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 ACSM3Q53FZ2 586 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 C8orf74Q6P047 294 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 OR8J2Q8NGG1 315 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 XAGE1AQ9HD64 81 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 SYNMO15061 1565 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 SCAF11Q99590 1463 aaKnown RBP1.88□□□□□ -2.11
SYNE2-210ENST00000553455 FN1P02751 2386 aaKnown RBP1.87□□□□□ -2.11
SYNE2-210ENST00000553455 LRRC7Q96NW7 1537 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 NUMA1Q14980 2115 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 TRAV7A0A075B6U4 112 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 KCNK1O00180 336 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 TECPR2O15040 1411 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 LEPROTO15243 131 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 PGLYRP1O75594 196 aaPredicted RBP1.87□□□□□ -2.11
SYNE2-210ENST00000553455 OR5G3P0C626 314 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 DCCP43146 1447 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 RAB14P61106 215 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 RELAQ04206 551 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 GLO1Q04760 184 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 SLC38A11Q08AI6 406 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 OR2F1Q13607 317 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 HIST3H3Q16695 136 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 ZNF705AQ6ZN79 300 aaPredicted RBP1.87□□□□□ -2.11
SYNE2-210ENST00000553455 C1orf158Q8N1D5 194 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 TBC1D19Q8N5T2 526 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 SLC35B4Q969S0 331 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 ROPN1LQ96C74 230 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 CNBD2Q96M20 576 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 PAQR5Q9NXK6 330 aaPredicted RBP1.87□□□□□ -2.11
SYNE2-210ENST00000553455 LSM5Q9Y4Y9 91 aaKnown RBP1.87□□□□□ -2.11
SYNE2-210ENST00000553455 SETBP1Q9Y6X0 1596 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 V9GYY5 206 aaPredicted RBP1.87□□□□□ -2.11
SYNE2-210ENST00000553455 MYO3AQ8NEV4 1616 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 PTPRBP23467 1997 aa1.87□□□□□ -2.11
SYNE2-210ENST00000553455 TRPM2O94759 1503 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 CEP152O94986 1710 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 DIP2AQ14689 1571 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 IGHV1-18A0A0C4DH31 117 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 H7C2G1 150 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 CREBL2O60519 120 aaPredicted RBP1.86□□□□□ -2.11
SYNE2-210ENST00000553455 C1QCP02747 245 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 FGF6P10767 208 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 PSMB8P28062 276 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 CSN1S1P47710 185 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 OR4D2P58180 307 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 MYL6P60660 151 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 TMEM258P61165 79 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 CAV1Q03135 178 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 ITGB3BPQ13352 177 aaPredicted RBP1.86□□□□□ -2.11
SYNE2-210ENST00000553455 GUK1Q16774 197 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 CCDC122Q5T0U0 273 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 DYNAPQ8N1N2 210 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 SLC7A6Q92536 515 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 OR8D2Q9GZM6 311 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 RSL24D1Q9UHA3 163 aaKnown RBP1.86□□□□□ -2.11
SYNE2-210ENST00000553455 NAT8Q9UHE5 227 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 TIMM9Q9Y5J7 89 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 LAMC1P11047 1609 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 ALKQ9UM73 1620 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 NKTRP30414 1462 aaKnown RBP1.86□□□□□ -2.11
SYNE2-210ENST00000553455 XIRP1Q702N8 1843 aaKnown RBP1.86□□□□□ -2.11
SYNE2-210ENST00000553455 IQGAP1P46940 1657 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 NEXMIFQ5QGS0 1516 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 POLR1AO95602 1720 aaPredicted RBP1.86□□□□□ -2.11
SYNE2-210ENST00000553455 SPHKAPQ2M3C7 1700 aa1.86□□□□□ -2.11
SYNE2-210ENST00000553455 NWD1Q149M9 1564 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 NRXN3Q9Y4C0 1643 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 KIF1BO60333 1816 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 EEF1E1-BLOC1S5C9J1V9 151 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 M0R036 132 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 SRP19P09132 144 aaKnown RBP1.85□□□□□ -2.11
SYNE2-210ENST00000553455 KCNE1P15382 129 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 S100A7P31151 101 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 SYPL2Q5VXT5 272 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 KLK6Q92876 244 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 CISHQ9NSE2 258 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 TIMM22Q9Y584 194 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 DLC1Q96QB1 1528 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 PPLO60437 1756 aa1.85□□□□□ -2.11
SYNE2-210ENST00000553455 CCDC144AA2RUR9 1427 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 PIK3C2GO75747 1445 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 MYOM2P54296 1465 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 IFT172Q9UG01 1749 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 TRAV38-1A0A0B4J264 116 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 NAPSAO96009 420 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 PRB1P04280 392 aa1.84□□□□□ -2.11
SYNE2-210ENST00000553455 HLA-DMBP28068 263 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms