RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 RHOBP62745 196 aa15.03■□□□□ -0
PRPF40B-208ENST00000548436 TMEM144Q7Z5S9 345 aa15.03■□□□□ -0
PRPF40B-208ENST00000548436 C8orf31Q8N9H6 132 aa15.03■□□□□ -0
PRPF40B-208ENST00000548436 OR5T1Q8NG75 326 aa15.03■□□□□ -0
PRPF40B-208ENST00000548436 PYGO2Q9BRQ0 406 aa15.03■□□□□ -0
PRPF40B-208ENST00000548436 TCEAL7Q9BRU2 100 aa15.03■□□□□ -0
PRPF40B-208ENST00000548436 SLC45A2Q9UMX9 530 aa15.03■□□□□ -0
PRPF40B-208ENST00000548436 YTHDF2Q9Y5A9 579 aaKnown RBP15.03■□□□□ -0
PRPF40B-208ENST00000548436 B9A039 149 aa15.02■□□□□ -0
PRPF40B-208ENST00000548436 F6UZH7 168 aa15.02■□□□□ -0
PRPF40B-208ENST00000548436 CDX1P47902 265 aaPredicted RBP15.02■□□□□ -0
PRPF40B-208ENST00000548436 RPL8P62917 257 aaKnown RBP15.02■□□□□ -0
PRPF40B-208ENST00000548436 GAMTQ14353 236 aa15.02■□□□□ -0
PRPF40B-208ENST00000548436 LINC01551Q86U37 167 aa15.02■□□□□ -0
PRPF40B-208ENST00000548436 C11orf42Q8N5U0 333 aa15.02■□□□□ -0
PRPF40B-208ENST00000548436 OR1L8Q8NGR8 309 aa15.02■□□□□ -0
PRPF40B-208ENST00000548436 TMEM186Q96B77 213 aa15.02■□□□□ -0
PRPF40B-208ENST00000548436 ANAPC16Q96DE5 110 aa15.02■□□□□ -0
PRPF40B-208ENST00000548436 AURKAIP1Q9NWT8 199 aaPredicted RBP15.02■□□□□ -0
PRPF40B-208ENST00000548436 GRNP28799 593 aaKnown RBP15.02□□□□□ -0.01
PRPF40B-208ENST00000548436 C4orf17Q53FE4 359 aa15.02□□□□□ -0.01
PRPF40B-208ENST00000548436 FAM71F2Q6NXP2 309 aa15.02□□□□□ -0.01
PRPF40B-208ENST00000548436 OR4C13Q8NGP0 309 aa15.02□□□□□ -0.01
PRPF40B-208ENST00000548436 COMMD5Q9GZQ3 224 aa15.02□□□□□ -0.01
PRPF40B-208ENST00000548436 RELNP78509 3460 aa15.02□□□□□ -0.01
PRPF40B-208ENST00000548436 A0A087X0M5 115 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 A0A1B0GX30 115 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 FAM90A27PA6NNH2 459 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 LYNX1G3V0Z9 82 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 TGOLN2O43493 480 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 LYNX1P0DP58 116 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 PDPNQ86YL7 162 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 ZNF114Q8NC26 417 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 TXNDC17Q9BRA2 123 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 PLXNB1O43157 2135 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 SCO2A0A1W2PP80 73 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 PGPEP1LA6NFU8 196 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 ACTL6BO94805 426 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 IGLV2-23P01705 113 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 IGHV1-8P0DP01 117 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 USF1P22415 310 aaPredicted RBP15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 GATA2P23769 480 aaPredicted RBP15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 ATP5IP56385 69 aaPredicted RBP15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 CLEC12BQ2HXU8 276 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 MIR17HGQ75NE6 70 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 OR4P4Q8NGL7 312 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 OR9G1Q8NH87 305 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 OR5B12Q96R08 314 aa15.01□□□□□ -0.01
PRPF40B-208ENST00000548436 TRBV20OR9-2A0A075B6H5 130 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 CGB1A6NKQ9 187 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 SIAH2O43255 324 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 S100PP25815 95 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 ZNF137PP52743 207 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 FAM78BQ5VT40 261 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 GFI1BQ5VTD9 330 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 TMEM167AQ8TBQ9 72 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 SRD5A3Q9H8P0 318 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 NAV3Q8IVL0 2385 aa15□□□□□ -0.01
PRPF40B-208ENST00000548436 OR10J1P30954 320 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 CHRNA7P36544 502 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 CA7P43166 264 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 CD69Q07108 199 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 C10orf55Q5SWW7 151 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 RITA1Q96K30 269 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 RAXQ9Y2V3 346 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 WASHC3Q9Y3C0 194 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 DLX1P56177 255 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 TGIF2LXQ8IUE1 241 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 PCGF1Q9BSM1 259 aa14.99□□□□□ -0.01
PRPF40B-208ENST00000548436 SOD3P08294 240 aa14.98□□□□□ -0.01
PRPF40B-208ENST00000548436 C1QTNF9P0C862 333 aa14.98□□□□□ -0.01
PRPF40B-208ENST00000548436 CASP6P55212 293 aa14.98□□□□□ -0.01
PRPF40B-208ENST00000548436 ERHP84090 104 aaKnown RBP14.98□□□□□ -0.01
PRPF40B-208ENST00000548436 OR4X1Q8NH49 305 aa14.98□□□□□ -0.01
PRPF40B-208ENST00000548436 OR4A5Q8NH83 315 aa14.98□□□□□ -0.01
PRPF40B-208ENST00000548436 ZNF430Q9H8G1 570 aaPredicted RBP14.98□□□□□ -0.01
PRPF40B-208ENST00000548436 CACNA1AO00555 2505 aa14.98□□□□□ -0.01
PRPF40B-208ENST00000548436 A0A1W2PPQ1 181 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 INS-IGF2F8WCM5 200 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 WT1-ASQ06250 92 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 VSTM2AQ8TAG5 236 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 TMEM133Q9H2Q1 129 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 NIT2Q9NQR4 276 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 FUT9Q9Y231 359 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 MALRD1Q5VYJ5 2156 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 LRBAP50851 2863 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 CDSNQ15517 529 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 FBXL19-AS1Q494R0 122 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 MUC15Q8N387 334 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 OR2T6Q8NHC8 308 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 TPSG1Q9NRR2 321 aa14.97□□□□□ -0.01
PRPF40B-208ENST00000548436 IGF2RP11717 2491 aa14.96□□□□□ -0.01
PRPF40B-208ENST00000548436 CCL21O00585 134 aa14.96□□□□□ -0.01
PRPF40B-208ENST00000548436 GGCTO75223 188 aaKnown RBP14.96□□□□□ -0.01
PRPF40B-208ENST00000548436 SRP14P37108 136 aaKnown RBP14.96□□□□□ -0.01
PRPF40B-208ENST00000548436 PRB3Q04118 309 aaPredicted RBP14.96□□□□□ -0.01
PRPF40B-208ENST00000548436 MRGPRG-AS1Q2M3A8 158 aa14.96□□□□□ -0.01
PRPF40B-208ENST00000548436 ZNF841Q6ZN19 808 aa14.96□□□□□ -0.01
PRPF40B-208ENST00000548436 HIST3H2BBQ8N257 126 aa14.96□□□□□ -0.01
PRPF40B-208ENST00000548436 SLC35E1Q96K37 410 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms