RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 HLA-DRB5Q30154 266 aa9.37□□□□□ -0.91
C11orf54-214ENST00000540113 C10orf55Q5SWW7 151 aa9.37□□□□□ -0.91
C11orf54-214ENST00000540113 OR1P1Q8NH06 330 aa9.37□□□□□ -0.91
C11orf54-214ENST00000540113 PRO1933Q9H354 126 aa9.37□□□□□ -0.91
C11orf54-214ENST00000540113 SAP30LQ9HAJ7 183 aa9.37□□□□□ -0.91
C11orf54-214ENST00000540113 PITPNC1Q9UKF7 332 aa9.37□□□□□ -0.91
C11orf54-214ENST00000540113 LRBAP50851 2863 aa9.37□□□□□ -0.91
C11orf54-214ENST00000540113 POLEQ07864 2286 aa9.37□□□□□ -0.91
C11orf54-214ENST00000540113 PLXNB1O43157 2135 aa9.37□□□□□ -0.91
C11orf54-214ENST00000540113 SLC17A3O00476 420 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 GGCTO75223 188 aaKnown RBP9.36□□□□□ -0.91
C11orf54-214ENST00000540113 AMBPP02760 352 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 FAM87AP0C7U9 286 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 OR10J1P30954 320 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 RHOBP62745 196 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 SSBP2P81877 361 aaPredicted RBP9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PRCDQ00LT1 54 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 TMEM183AQ8IXX5 376 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 ADTRPQ96IZ2 230 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 HARBI1Q96MB7 349 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PRDM13Q9H4Q3 707 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PRNDQ9UKY0 176 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 NKX6-3A6NJ46 265 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 K7EN84 100 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 TGOLN2O43493 480 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 SNRPCP09234 159 aaKnown RBP9.36□□□□□ -0.91
C11orf54-214ENST00000540113 OR10J4P0C629 311 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 TNFRSF1AP19438 455 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PRR20EP86478 221 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PRR20CP86479 221 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PRR20DP86480 221 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PRR20BP86481 221 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PRR20AP86496 221 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PSG5Q15238 335 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 ASPHD1Q5U4P2 390 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 OR2T6Q8NHC8 308 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 SGMS2Q8NHU3 365 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PFDN5Q99471 154 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 NABP2Q9BQ15 211 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 RAB9BQ9NP90 201 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 DMRT1Q9Y5R6 373 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 LINC00312Q9Y6C7 94 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 PTPRQQ9UMZ3 2332 aa9.36□□□□□ -0.91
C11orf54-214ENST00000540113 MDFIC2A0A1B0GVS7 189 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 SRP14P37108 136 aaKnown RBP9.35□□□□□ -0.91
C11orf54-214ENST00000540113 RPL29P47914 159 aaKnown RBP9.35□□□□□ -0.91
C11orf54-214ENST00000540113 OR5I1Q13606 314 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 KCNIP4Q6PIL6 250 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 DMRTC2Q8IXT2 367 aaPredicted RBP9.35□□□□□ -0.91
C11orf54-214ENST00000540113 RITA1Q96K30 269 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 ZNF714Q96N38 554 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 CTSZQ9UBR2 303 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 NAV3Q8IVL0 2385 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 PPIAL4EA0A075B759 164 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 IGHV3-72A0A0B4J1Y9 119 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 SHISA9B4DS77 424 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 PPIAL4DF5H284 164 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 TMEM178BH3BS89 294 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 FRMD6-AS1P0C7T7 363 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 PPIAL4FP0DN26 164 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 POU2AF1Q16633 256 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 MORN5Q5VZ52 161 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 UNQ6494/PRO21346Q6UXR6 183 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 ACY3Q96HD9 319 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 SLC45A2Q9UMX9 530 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 RAXQ9Y2V3 346 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 PPIAL4AQ9Y536 164 aa9.35□□□□□ -0.91
C11orf54-214ENST00000540113 TLN1Q9Y490 2541 aaKnown RBP9.35□□□□□ -0.91
C11orf54-214ENST00000540113 DCHS2Q6V1P9 2916 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 TRAV5A0A0B4J249 113 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 LYNX1G3V0Z9 82 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 H0YJW9 148 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 REG1AP05451 166 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 APELAP0DMC3 54 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 LYNX1P0DP58 116 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 RNASE2P10153 161 aaKnown RBP9.34□□□□□ -0.91
C11orf54-214ENST00000540113 RAB31Q13636 194 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 TMEM249Q2WGJ8 235 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 ZNF833PQ6ZTB9 187 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 LHFPL4Q7Z7J7 247 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 ZNF503Q96F45 646 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 GAL3ST2Q9H3Q3 398 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 E7EQL1 145 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 OR7C2O60412 319 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 CRYBB3P26998 211 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 OR10X1Q8NGY0 326 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 TPSG1Q9NRR2 321 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
C11orf54-214ENST00000540113 DVL1O14640 695 aa9.33□□□□□ -0.92
C11orf54-214ENST00000540113 TNFRSF13BO14836 293 aaPredicted RBP9.33□□□□□ -0.92
C11orf54-214ENST00000540113 HIST1H1BP16401 226 aaKnown RBP9.33□□□□□ -0.92
C11orf54-214ENST00000540113 LGALS4P56470 323 aa9.33□□□□□ -0.92
C11orf54-214ENST00000540113 TEX38Q6PEX7 206 aa9.33□□□□□ -0.92
C11orf54-214ENST00000540113 C19orf35Q6ZS72 473 aa9.33□□□□□ -0.92
C11orf54-214ENST00000540113 COMMD5Q9GZQ3 224 aa9.33□□□□□ -0.92
C11orf54-214ENST00000540113 TMEM106BQ9NUM4 274 aa9.33□□□□□ -0.92
C11orf54-214ENST00000540113 ZNF257Q9Y2Q1 563 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms