RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NFYBP25208 207 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 RPS10P46783 165 aaKnown RBP2.11□□□□□ -2.07
SNHG1-202ENST00000535689 MRPL19P49406 292 aaKnown RBP2.11□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF816Q0VGE8 651 aaPredicted RBP2.11□□□□□ -2.07
SNHG1-202ENST00000535689 GK3PQ14409 553 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 WHAMMP3Q1A5X7 153 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 LGALS9BQ3B8N2 356 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 Q3ZCU0 254 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 AKIRIN2Q53H80 203 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 SPIN3Q5JUX0 258 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 CLVS2Q5SYC1 327 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 LDLRAD2Q5SZI1 272 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 PLCXD3Q63HM9 321 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF660Q6AZW8 331 aaPredicted RBP2.11□□□□□ -2.07
SNHG1-202ENST00000535689 DEGS2Q6QHC5 323 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 WDR86Q86TI4 376 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 LHFPL3Q86UP9 236 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 RBM45Q8IUH3 476 aaKnown RBP2.11□□□□□ -2.07
SNHG1-202ENST00000535689 LINC00471Q8N535 108 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 YIPF7Q8N8F6 280 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 CHST4Q8NCG5 386 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 PROKR2Q8NFJ6 384 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 GPR32P1Q8NGA4 272 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 OR9G4Q8NGQ1 327 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 MYOZ3Q8TDC0 251 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 NDFIP1Q9BT67 221 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 C20orf24Q9BUV8 137 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 TOLLIPQ9H0E2 274 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 ADA2Q9NZK5 511 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 CCDC167Q9P0B6 97 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 VAPAQ9P0L0 249 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 BAIAP2Q9UQB8 552 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 CSDC2Q9Y534 153 aaKnown RBP2.11□□□□□ -2.07
SNHG1-202ENST00000535689 ALMS1Q8TCU4 4167 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 TRAV6A0A075B6T7 132 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 A0A087WUU8 490 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 IGHV1-3A0A0C4DH29 117 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 KIR2DL5BA0A0G2JN68 375 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 KIR2DL5BA0A0G2JPC4 375 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 KBTBD11-OT1A0A1B0GTJ5 212 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 SMIM23A6NLE4 172 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 LYRM9A8MSI8 78 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 IGLL5B9A064 214 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 H3BUA1 57 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 NDUFAB1O14561 156 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 GOSR2O14653 212 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 IFNGP01579 166 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 RPSAP08865 295 aaKnown RBP2.1□□□□□ -2.07
SNHG1-202ENST00000535689 STAG3L3P0CL85 134 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 SLC2A1P11166 492 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 KDELR2P33947 212 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 CXCL5P42830 114 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 KCNJ3P48549 501 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF121P58317 390 aaPredicted RBP2.1□□□□□ -2.07
SNHG1-202ENST00000535689 ELF3P78545 371 aaPredicted RBP2.1□□□□□ -2.07
SNHG1-202ENST00000535689 ERCC8Q13216 396 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 TMED1Q13445 227 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 EDDM3AQ14507 147 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 RPEL1Q2QD12 228 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 GLT8D1Q68CQ7 371 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 Q6P435 159 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 Q6ZVH6 145 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 LYG2Q86SG7 212 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 OFCC1Q8IZS5 231 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 KIR2DL5AQ8N109 375 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 ARRDC1Q8N5I2 433 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 OR8B12Q8NGG6 310 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 OR4D11Q8NGI4 311 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 OR10A6Q8NH74 314 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 KIR2DL5BQ8NHK3 375 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 THEM6Q8WUY1 208 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 GIMAP1Q8WWP7 306 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 RPUSD4Q96CM3 377 aaKnown RBP2.1□□□□□ -2.07
SNHG1-202ENST00000535689 RCN3Q96D15 328 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 USMG5Q96IX5 58 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 CEP19Q96LK0 163 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 NMNAT3Q96T66 252 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 CGREF1Q99674 301 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 RNF5Q99942 180 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 RARRES2Q99969 163 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 NABP2Q9BQ15 211 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF251Q9BRH9 671 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 GGTLC1Q9BX51 225 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 GABARAPL3Q9BY60 117 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 MROQ9BYG7 248 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 HES4Q9HCC6 221 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 HMG20AQ9NP66 347 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 GID8Q9NWU2 228 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 IDI2-AS1Q9NZ38 188 aa2.1□□□□□ -2.07
SNHG1-202ENST00000535689 IGLV1-50A0A075B6I6 118 aa2.09□□□□□ -2.07
SNHG1-202ENST00000535689 TRAV25A0A0B4J276 109 aa2.09□□□□□ -2.07
SNHG1-202ENST00000535689 TMEM269A0A1B0GVZ9 245 aa2.09□□□□□ -2.07
SNHG1-202ENST00000535689 DHRS12A0PJE2 317 aa2.09□□□□□ -2.07
SNHG1-202ENST00000535689 C16orf90A8MZG2 172 aa2.09□□□□□ -2.07
SNHG1-202ENST00000535689 INS-IGF2F8WCM5 200 aa2.09□□□□□ -2.07
SNHG1-202ENST00000535689 PPP1R2P9O14990 202 aa2.09□□□□□ -2.07
SNHG1-202ENST00000535689 MRPS12O15235 138 aaKnown RBP2.09□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF737O75373 536 aa2.09□□□□□ -2.07
SNHG1-202ENST00000535689 GATBO75879 557 aaKnown RBP2.09□□□□□ -2.07
SNHG1-202ENST00000535689 DHRS3O75911 302 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms