RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 HIST2H2BEQ16778 126 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 LTC4SQ16873 150 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 LGALS9BQ3B8N2 356 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 LGALSLQ3ZCW2 172 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 CCDC153Q494R4 210 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 KRTAP13-2Q52LG2 175 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 BRMS1LQ5PSV4 323 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 DNLZQ5SXM8 178 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 LDLRAD2Q5SZI1 272 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 LGALS9CQ6DKI2 356 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZFAND6Q6FIF0 208 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 SSX8Q7RTT4 187 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 TCF24Q7RTU0 167 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 SPATA12Q7Z6I5 190 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 CROCCP2Q86T23 111 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 ANGPTL5Q86XS5 388 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 EXOC3-AS1Q8N2X6 119 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 PACRGLQ8N7B6 248 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR10D4PQ8NGN7 298 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 KLF14Q8TD94 323 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 THEM6Q8WUY1 208 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 H1FXQ92522 213 aaKnown RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST1H2BHQ93079 126 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 ISOC1Q96CN7 298 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 CAPZA3Q96KX2 299 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST1H2BNQ99877 126 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST1H2BMQ99879 126 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 TUBA4BQ9H853 241 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 RASL12Q9NYN1 266 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 MARCOQ9UEW3 520 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 JPT1Q9UK76 154 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 LAMTOR2Q9Y2Q5 125 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 AMMECR1Q9Y4X0 333 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 NUBP2Q9Y5Y2 271 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 U3KQK5 164 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 YLPM1P49750 1951 aaKnown RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 SVILO95425 2214 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 SCN1AP35498 2009 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZCCHC11Q5TAX3 1644 aaKnown RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 PLXNB3Q9ULL4 1909 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 DENND4BO75064 1496 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 RPRD2Q5VT52 1461 aaKnown RBP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGKV1D-17A0A075B6S4 117 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGKV1OR2-108A0A075B7D4 117 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGHV3-73A0A0B4J1V6 119 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 IRGMA1A4Y4 181 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 DEGS1O15121 323 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 BANF1O75531 89 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGLV3-19P01714 112 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 C1QAP02745 245 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 CSN2P05814 226 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 DBIP07108 87 aaKnown RBP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 CCL3P10147 92 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 GZMHP20718 246 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 CRHBPP24387 322 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 S100A4P26447 101 aaKnown RBP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 DEFA3P59666 94 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 AP1S1P61966 158 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 RPS11P62280 158 aaKnown RBP eCLIP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 PSPHP78330 225 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 RPL18Q07020 188 aaKnown RBP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 BAMBIQ13145 260 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 AADACL3Q5VUY0 350 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 AGTRAPQ6RW13 159 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 LCA10Q71F78 164 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 ADM2Q7Z4H4 148 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 TMEM86AQ8N2M4 240 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 CNEP1R1Q8N9A8 125 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR4D11Q8NGI4 311 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR5A1Q8NGJ0 315 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 RPS4Y2Q8TD47 263 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 RNASE6Q93091 150 aaKnown RBP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 ADAT3Q96EY9 351 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 CCDC115Q96NT0 180 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 TSC22D3Q99576 134 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 SEC22CQ9BRL7 303 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 TM2D3Q9BRN9 247 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 UPK3BQ9BT76 320 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR2J1Q9GZK6 312 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 TMEM126AQ9H061 195 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 SMDT1Q9H4I9 107 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 IL36BQ9NZH7 164 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 CKLFQ9UBR5 152 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 MCTS1Q9ULC4 181 aaKnown RBP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 PAIP2BQ9ULR5 123 aaKnown RBP1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 FUT9Q9Y231 359 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 ASB4Q9Y574 426 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 CEP170Q5SW79 1584 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 HECW2Q9P2P5 1572 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 PTPRJQ12913 1337 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 COL1A2P08123 1366 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 ABCC12Q96J65 1359 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 CEP152O94986 1710 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 CRB1P82279 1406 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 UHRF1BP1Q6BDS2 1440 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 GPR179Q6PRD1 2367 aa1.32□□□□□ -2.2
HMGB1P35-201ENST00000503360 NEO1Q92859 1461 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 ARAP1Q96P48 1450 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 BAZ1BQ9UIG0 1483 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms