RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 LRRC8AQ8IWT6 810 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 ZNF563Q8TA94 476 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 PANX1Q96RD7 426 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 SHCBP1LQ9BZQ2 653 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 AUNIPQ9H7T9 357 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 OR2S2Q9NQN1 319 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 CHRAC1Q9NRG0 131 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 DDX18Q9NVP1 670 aaKnown RBP1.86□□□□□ -2.11
ITGB1-214ENST00000488427 MRPL22Q9NWU5 206 aaKnown RBP1.86□□□□□ -2.11
ITGB1-214ENST00000488427 PTTG3PQ9NZH4 202 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 SAMHD1Q9Y3Z3 626 aaKnown RBP1.86□□□□□ -2.11
ITGB1-214ENST00000488427 R4GN34 69 aa1.86□□□□□ -2.11
ITGB1-214ENST00000488427 IGHV3OR15-7A0A075B7D8 119 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.85□□□□□ -2.11
ITGB1-214ENST00000488427 C15orf65H3BRN8 121 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 DEFB4AO15263 64 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 CCDC22O60826 627 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 SCN2BO60939 215 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 PROSCO94903 275 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 IGLV2-8P01709 118 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 IGHG2P01859 326 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 KLK1P06870 262 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 SYT1P21579 422 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 PSMB8P28062 276 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 PSMB2P49721 201 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 RAB11AP62491 216 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 DYNC1I2Q13409 638 aaKnown RBP1.85□□□□□ -2.11
ITGB1-214ENST00000488427 C1DQ13901 141 aaKnown RBP1.85□□□□□ -2.11
ITGB1-214ENST00000488427 C18orf21Q32NC0 220 aaPredicted RBP1.85□□□□□ -2.11
ITGB1-214ENST00000488427 CDKL4Q5MAI5 379 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 LDLRAD2Q5SZI1 272 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 ASCL4Q6XD76 172 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 GRINAQ7Z429 371 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 OR5AS1Q8N127 324 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 SLC22A24Q8N4F4 322 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 FAM216BQ8N7L0 139 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 C8orf31Q8N9H6 132 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 INO80EQ8NBZ0 244 aaPredicted RBP1.85□□□□□ -2.11
ITGB1-214ENST00000488427 NDNFQ8TB73 568 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 MYOZ3Q8TDC0 251 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 CMBLQ96DG6 245 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 Q96MT0 163 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 SCGB3A2Q96PL1 93 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 CCL13Q99616 98 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 TAPBPLQ9BX59 468 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 TAS2R13Q9NYV9 303 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 ZNF257Q9Y2Q1 563 aa1.85□□□□□ -2.11
ITGB1-214ENST00000488427 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
ITGB1-214ENST00000488427 TMED7-TICAM2A0A0A6YYA0 188 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 CLDN24A6NM45 220 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 ODF3BA8MYP8 253 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 C9JQL5 133 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 WRBO00258 174 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 UPK1AO00322 258 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 CASQ2O14958 399 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-214ENST00000488427 MPDU1O75352 247 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 PSMG1O95456 288 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 UBCP0CG48 685 aaKnown RBP1.84□□□□□ -2.11
ITGB1-214ENST00000488427 RPS5P46782 204 aaKnown RBP1.84□□□□□ -2.11
ITGB1-214ENST00000488427 C2orf54Q08AI8 447 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 SKP2Q13309 424 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 APOFQ13790 326 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 PABPC1L2AQ5JQF8 200 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 TMEM236Q5W0B7 351 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 PDPNQ86YL7 162 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 C20orf196Q8IYI0 205 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 CLDN22Q8N7P3 220 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 C5orf56Q8N8D9 126 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 LRRC75AQ8NAA5 344 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 OR9Q1Q8NGQ5 310 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 OR2K2Q8NGT1 345 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 OR52E5Q8NH55 327 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 OR5K1Q8NHB7 308 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 ACTL9Q8TC94 416 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 ORAOV1Q8WV07 137 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 CIDECQ96AQ7 238 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-214ENST00000488427 RBFOX1Q9NWB1 397 aaKnown RBP1.84□□□□□ -2.11
ITGB1-214ENST00000488427 TRAPPC1Q9Y5R8 145 aa1.84□□□□□ -2.11
ITGB1-214ENST00000488427 IGHV6-1A0A0B4J1U7 121 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 NCF1BA6NI72 391 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-214ENST00000488427 NCF1CA8MVU1 366 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-214ENST00000488427 APOC4-APOC2K7ER74 178 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 FGF16O43320 207 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 STK16O75716 305 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 ZNF189O75820 626 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-214ENST00000488427 APOC2P02655 101 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 LGALS1P09382 135 aaKnown RBP1.83□□□□□ -2.12
ITGB1-214ENST00000488427 HLA-GP17693 338 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 TUBG1P23258 451 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 IL3RAP26951 378 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 CD200P41217 278 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 SLC1A2P43004 574 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 SERPINB8P50452 374 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 POLR2HP52434 150 aaKnown RBP1.83□□□□□ -2.12
ITGB1-214ENST00000488427 UBE2MP61081 183 aaKnown RBP1.83□□□□□ -2.12
ITGB1-214ENST00000488427 ZNF141Q15928 474 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 TTC32Q5I0X7 151 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 MINOS1Q5TGZ0 78 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 TEX36Q5VZQ5 186 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms