RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 FLVCR2Q9UPI3 526 aa15.22■□□□□ 0.03
HDAC7-220ENST00000471235 TRBV12-3P01733 135 aa15.21■□□□□ 0.03
HDAC7-220ENST00000471235 VAMP1P23763 118 aa15.21■□□□□ 0.03
HDAC7-220ENST00000471235 BEAN1Q3B7T3 259 aa15.21■□□□□ 0.03
HDAC7-220ENST00000471235 SPINK9Q5DT21 86 aa15.21■□□□□ 0.03
HDAC7-220ENST00000471235 LGI3Q8N145 548 aa15.21■□□□□ 0.03
HDAC7-220ENST00000471235 GPR146Q96CH1 333 aa15.21■□□□□ 0.03
HDAC7-220ENST00000471235 CACNG5Q9UF02 275 aa15.21■□□□□ 0.03
HDAC7-220ENST00000471235 F11RQ9Y624 299 aaKnown RBP15.21■□□□□ 0.03
HDAC7-220ENST00000471235 SFT2D2O95562 160 aa15.2■□□□□ 0.02
HDAC7-220ENST00000471235 DUS4LO95620 317 aaKnown RBP15.2■□□□□ 0.02
HDAC7-220ENST00000471235 MFAP2P55001 183 aa15.2■□□□□ 0.02
HDAC7-220ENST00000471235 UBE2MP61081 183 aaKnown RBP15.2■□□□□ 0.02
HDAC7-220ENST00000471235 ANKRD55Q3KP44 614 aa15.2■□□□□ 0.02
HDAC7-220ENST00000471235 KPRPQ5T749 579 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-220ENST00000471235 DCUN1D4Q92564 292 aa15.2■□□□□ 0.02
HDAC7-220ENST00000471235 PLEKHA3Q9HB20 300 aa15.2■□□□□ 0.02
HDAC7-220ENST00000471235 PEF1Q9UBV8 284 aaKnown RBP15.2■□□□□ 0.02
HDAC7-220ENST00000471235 A0A0B4J2A0 478 aa15.19■□□□□ 0.02
HDAC7-220ENST00000471235 HOXD3P31249 432 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-220ENST00000471235 AARDQ4LEZ3 155 aa15.19■□□□□ 0.02
HDAC7-220ENST00000471235 NMSQ5H8A3 153 aa15.19■□□□□ 0.02
HDAC7-220ENST00000471235 OR2C3Q8N628 320 aa15.19■□□□□ 0.02
HDAC7-220ENST00000471235 DLX4Q92988 240 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-220ENST00000471235 PDCD10Q9BUL8 212 aa15.19■□□□□ 0.02
HDAC7-220ENST00000471235 MCRIP2Q9BUT9 160 aaKnown RBP15.19■□□□□ 0.02
HDAC7-220ENST00000471235 RANGRFQ9HD47 186 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-220ENST00000471235 SHPKQ9UHJ6 478 aa15.19■□□□□ 0.02
HDAC7-220ENST00000471235 TBC1D24Q9ULP9 559 aa15.19■□□□□ 0.02
HDAC7-220ENST00000471235 S4R3C0 116 aa15.19■□□□□ 0.02
HDAC7-220ENST00000471235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.18■□□□□ 0.02
HDAC7-220ENST00000471235 MFSD2BA6NFX1 497 aa15.18■□□□□ 0.02
HDAC7-220ENST00000471235 IFNA17P01571 189 aa15.18■□□□□ 0.02
HDAC7-220ENST00000471235 IGHV3-23P01764 117 aa15.18■□□□□ 0.02
HDAC7-220ENST00000471235 LYZL2Q7Z4W2 148 aa15.18■□□□□ 0.02
HDAC7-220ENST00000471235 CCDC140Q96MF4 163 aa15.18■□□□□ 0.02
HDAC7-220ENST00000471235 C20orf85Q9H1P6 137 aa15.18■□□□□ 0.02
HDAC7-220ENST00000471235 DUXBA0A1W2PPF3 345 aa15.17■□□□□ 0.02
HDAC7-220ENST00000471235 OVOL1O14753 267 aa15.17■□□□□ 0.02
HDAC7-220ENST00000471235 CYB5BO43169 146 aa15.17■□□□□ 0.02
HDAC7-220ENST00000471235 UPK1BO75841 260 aa15.17■□□□□ 0.02
HDAC7-220ENST00000471235 ANXA7P20073 488 aaKnown RBP15.17■□□□□ 0.02
HDAC7-220ENST00000471235 ZP3P21754 424 aa15.17■□□□□ 0.02
HDAC7-220ENST00000471235 LRTM2Q8N967 370 aa15.17■□□□□ 0.02
HDAC7-220ENST00000471235 ZNF114Q8NC26 417 aa15.17■□□□□ 0.02
HDAC7-220ENST00000471235 EEF1AKMT3Q96AZ1 226 aa15.17■□□□□ 0.02
HDAC7-220ENST00000471235 GPR61Q9BZJ8 451 aa15.17■□□□□ 0.02
HDAC7-220ENST00000471235 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.17■□□□□ 0.02
HDAC7-220ENST00000471235 SEC14L6B5MCN3 397 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 INS-IGF2F8WCM5 200 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 BMPR1BO00238 502 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 HLA-AP01891 365 aaKnown RBP15.16■□□□□ 0.02
HDAC7-220ENST00000471235 SULT1A3P0DMM9 295 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 SULT1A4P0DMN0 295 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 HOXA1P49639 335 aaPredicted RBP15.16■□□□□ 0.02
HDAC7-220ENST00000471235 ASAH1Q13510 395 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 SLC25A24Q6NUK1 477 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 OR1P1Q8NH06 330 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 CXorf58Q96LI9 332 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 THYN1Q9P016 225 aa15.16■□□□□ 0.02
HDAC7-220ENST00000471235 C9orf170A2RU37 121 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 PPP5D1E7EU14 171 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 TCRBP04435 133 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 OR4E1P0C645 316 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 SPCS3P61009 180 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 IFITM3Q01628 133 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 SMCO1Q147U7 214 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 FAM209BQ5JX69 171 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 OR1L6Q8NGR2 347 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 OR52E5Q8NH55 327 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 DNAH3Q8TD57 4116 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 MEGF8Q7Z7M0 2845 aa15.15■□□□□ 0.02
HDAC7-220ENST00000471235 PIGBOS1A0A0B4J2F0 54 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 WIPF1O43516 503 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 NXPH3O95157 252 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 ERHP84090 104 aaKnown RBP15.14■□□□□ 0.01
HDAC7-220ENST00000471235 DEFA6Q01524 100 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 DHRS2Q13268 280 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 RPEL1Q2QD12 228 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 PDLIM3Q53GG5 364 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-220ENST00000471235 C9orf66Q5T8R8 295 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 CLEC19AQ6UXS0 136 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 LYG2Q86SG7 212 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 ZNF502Q8TBZ5 544 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 ENY2Q9NPA8 101 aa15.14■□□□□ 0.01
HDAC7-220ENST00000471235 TRBV7-1A0A0A6YYK4 115 aa15.13■□□□□ 0.01
HDAC7-220ENST00000471235 K7EIM0 57 aa15.13■□□□□ 0.01
HDAC7-220ENST00000471235 KLF5Q13887 457 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-220ENST00000471235 C4orf46Q504U0 113 aa15.13■□□□□ 0.01
HDAC7-220ENST00000471235 MZT2BQ6NZ67 158 aa15.13■□□□□ 0.01
HDAC7-220ENST00000471235 VN1R17PQ8TDU5 208 aa15.13■□□□□ 0.01
HDAC7-220ENST00000471235 NUDT15Q9NV35 164 aa15.13■□□□□ 0.01
HDAC7-220ENST00000471235 TRAV6A0A075B6T7 132 aa15.12■□□□□ 0.01
HDAC7-220ENST00000471235 IGHV3-21A0A0B4J1V1 117 aa15.12■□□□□ 0.01
HDAC7-220ENST00000471235 RNASE2P10153 161 aaKnown RBP15.12■□□□□ 0.01
HDAC7-220ENST00000471235 ARL3P36405 182 aa15.12■□□□□ 0.01
HDAC7-220ENST00000471235 SYNJ2BPP57105 145 aa15.12■□□□□ 0.01
HDAC7-220ENST00000471235 C11orf87Q6NUJ2 197 aa15.12■□□□□ 0.01
HDAC7-220ENST00000471235 MISP3Q96FF7 219 aa15.12■□□□□ 0.01
HDAC7-220ENST00000471235 A0A1B0GU03 582 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms