RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 CDC42P60953 191 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 HES1Q14469 280 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 IBA57Q5T440 356 aaKnown RBP2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 GOLT1AQ6ZVE7 132 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 TMED4Q7Z7H5 227 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 DYNAPQ8N1N2 210 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 SMIM20Q8N5G0 67 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 OR52R1Q8NGF1 315 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 ACOT12Q8WYK0 555 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 SLC7A6Q92536 515 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 PARVBQ9HBI1 364 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 ADGRB3O60242 1522 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRAV9-1A0A075B6T8 112 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRAV41A0A0B4J266 112 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRAV4A0A0B4J268 109 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 A0A0J9YW62 118 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 RBP1P09455 135 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 SMIM17P0DL12 118 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TAS2R41P59536 307 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 RAB14P61106 215 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 AP1S1P61966 158 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 GNG3P63215 75 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 MEF2BQ02080 365 aaPredicted RBP2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 RPL18Q07020 188 aaKnown RBP2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 POU6F1Q14863 301 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TAF9Q16594 264 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TMPPEQ6ZT21 453 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 LHFPL1Q86WI0 220 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 SLC25A40Q8TBP6 338 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 GINS3Q9BRX5 216 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 PSORS1C2Q9UIG4 136 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 UTP11Q9Y3A2 253 aaKnown RBP2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 CCDC88AQ3V6T2 1871 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 SYNMO15061 1565 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 CLDN25C9JDP6 229 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 ATG12O94817 140 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 C1QAP02745 245 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 PPBPP02775 128 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 GZMHP20718 246 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 SRIP30626 198 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 FUSP35637 526 aaKnown RBP eCLIP2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 ATP5G3P48201 142 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TPI1P60174 286 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 AKR1C1Q04828 323 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TPRXLQ17RH7 258 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 AGTRAPQ6RW13 159 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 ZNF767PQ75MW2 155 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TERB2Q8NHR7 220 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 GNPDA2Q8TDQ7 276 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 SELENOSQ9BQE4 189 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 VCX3BQ9H321 246 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TUBA4BQ9H853 241 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 MED29Q9NX70 200 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 NAT8Q9UHE5 227 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 MYH3P11055 1940 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TOPBP1Q92547 1522 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 ECM29Q5VYK3 1845 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 HEATR5AQ86XA9 2040 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRAV7A0A075B6U4 112 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 A0A1B0GVG6 124 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 FABP5P3A8MUU1 101 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 HMGB3O15347 200 aaKnown RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 MFSD11O43934 449 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 CIAO1O76071 339 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 IFNA1P01562 189 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 IGKV1-16P04430 117 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 ERP29P30040 261 aaKnown RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 SUPT4H1P63272 117 aaKnown RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 ARHGAP11BQ3KRB8 267 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 RPL22L1Q6P5R6 122 aaKnown RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 ZNF705AQ6ZN79 300 aaPredicted RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 Q6ZS52 159 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 TCF24Q7RTU0 167 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 SLC35E3Q7Z769 313 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 EXOC3-AS1Q8N2X6 119 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 FAM172AQ8WUF8 416 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 GPR146Q96CH1 333 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 Q9BRP9 147 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 CCDC90BQ9GZT6 254 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRABDQ9H4I3 376 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 SMPXQ9UHP9 88 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 SDK2Q58EX2 2172 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 KDM5BQ9UGL1 1544 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 ROCK1Q13464 1354 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 CLPSP04118 112 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 UCHL1P09936 223 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 PPIBP23284 216 aaKnown RBP1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 HIST1H4AP62805 103 aaKnown RBP1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 ZNF791Q3KP31 576 aaPredicted RBP1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 FAM27BQ5VT28 67 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 Q6Q795 121 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 BOLA2Q9H3K6 86 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 PRO2289Q9P1D8 64 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 PRNDQ9UKY0 176 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 PYCARDQ9ULZ3 195 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 UFC1Q9Y3C8 167 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 STRCQ7RTU9 1775 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 DENND4CQ5VZ89 1909 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 MYH2Q9UKX2 1941 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms