RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 OR2J3O76001 311 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 NDUFB6O95139 128 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 PRH1P02810 166 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 ERHP84090 104 aaKnown RBP10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 WT1-ASQ06250 92 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 C9orf66Q5T8R8 295 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 TMEM268Q5VZI3 342 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 REC114Q7Z4M0 266 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 LGI3Q8N145 548 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 CENPSQ8N2Z9 138 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 OR10W1Q8NGF6 305 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 OR52E5Q8NH55 327 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 ATP6V0BQ99437 205 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 ALX4Q9H161 411 aaPredicted RBP10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 SHPKQ9UHJ6 478 aa10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 F11RQ9Y624 299 aaKnown RBP10.07□□□□□ -0.8
SNRNP27-203ENST00000450162 NOTCH1P46531 2555 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 DBX1A6NMT0 343 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 IFNA17P01571 189 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 HOXD3P31249 432 aaPredicted RBP10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 MECP2P51608 486 aaKnown RBP10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 SUPT4H1P63272 117 aaKnown RBP10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 DEFA6Q01524 100 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 EXOSC2Q13868 293 aaKnown RBP10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 TMED4Q7Z7H5 227 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 OR2C3Q8N628 320 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 ZNF114Q8NC26 417 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 OR1P1Q8NH06 330 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 VN1R17PQ8TDU5 208 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 DCUN1D4Q92564 292 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 EEF1AKMT3Q96AZ1 226 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 WDR12Q9GZL7 423 aaKnown RBP10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 PLEKHA3Q9HB20 300 aa10.06□□□□□ -0.8
SNRNP27-203ENST00000450162 ANKRD34BA5PLL1 514 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 SEC14L6B5MCN3 397 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 NDUFB8O95169 186 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 REG1AP05451 166 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 SPCS3P61009 180 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 EGFEM1PQ0D2K5 195 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 KLF5Q13887 457 aaPredicted RBP10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 RPEL1Q2QD12 228 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 PDLIM3Q53GG5 364 aaPredicted RBP10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 SLC25A24Q6NUK1 477 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 SLC35G3Q8N808 338 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 LRTM2Q8N967 370 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 LHFPL5Q8TAF8 219 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 DLX4Q92988 240 aaPredicted RBP10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 ELOVL1Q9BW60 279 aa10.05□□□□□ -0.8
SNRNP27-203ENST00000450162 ST8SIA3O43173 380 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 LYRM1O43325 122 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 SFT2D2O95562 160 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 VAMP1P23763 118 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 SNCAP37840 140 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 CCR6P51684 374 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 SUB1P53999 127 aaKnown RBP eCLIP10.04□□□□□ -0.85e-7■■■■■ 30.2
SNRNP27-203ENST00000450162 SLURP1P55000 103 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 ZNF846Q147U1 533 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 IZUMO4Q1ZYL8 232 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 C1QL4Q86Z23 238 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 GPR146Q96CH1 333 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 ENY2Q9NPA8 101 aa10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 GAR1Q9NY12 217 aaKnown RBP10.04□□□□□ -0.8
SNRNP27-203ENST00000450162 A0A0G2JRQ6 117 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 A0A1B0GU03 582 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 LINC00854A0A1B0GVQ3 168 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 PLA2G10O15496 165 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 GGCTO75223 188 aaKnown RBP10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 SULT1A3P0DMM9 295 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 SULT1A4P0DMN0 295 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 SLC25A6P12236 298 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 DEFA5Q01523 94 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 NMSQ5H8A3 153 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 ACSM6Q6P461 480 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 Q6ZRM9 215 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 OR4C12Q96R67 309 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 CACNG5Q9UF02 275 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 TMED3Q9Y3Q3 217 aa10.03□□□□□ -0.8
SNRNP27-203ENST00000450162 CORTO00230 105 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 BMPR1BO00238 502 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 CLEC3BP05452 202 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 BTCP35070 178 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 PPP1R1AQ13522 171 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 SMCO1Q147U7 214 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 MZT2BQ6NZ67 158 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 C19orf35Q6ZS72 473 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 LYZL2Q7Z4W2 148 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 GPHB5Q86YW7 130 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 ZNF502Q8TBZ5 544 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 CCDC140Q96MF4 163 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 SIGLEC8Q9NYZ4 499 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 PEMTQ9UBM1 199 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 DMRT1Q9Y5R6 373 aa10.02□□□□□ -0.81
SNRNP27-203ENST00000450162 SAP30O75446 220 aa10.01□□□□□ -0.81
SNRNP27-203ENST00000450162 TRBV12-3P01733 135 aa10.01□□□□□ -0.81
SNRNP27-203ENST00000450162 ARL3P36405 182 aa10.01□□□□□ -0.81
SNRNP27-203ENST00000450162 HOXA1P49639 335 aaPredicted RBP10.01□□□□□ -0.81
SNRNP27-203ENST00000450162 ATP5IP56385 69 aaPredicted RBP10.01□□□□□ -0.81
SNRNP27-203ENST00000450162 FAM106AQ4KMX7 169 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms