RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 NDUFB8O95169 186 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 ZP3P21754 424 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 VAMP1P23763 118 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 MECP2P51608 486 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 AARDQ4LEZ3 155 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 FAM209BQ5JX69 171 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 LGI3Q8N145 548 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 SLC35G3Q8N808 338 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 GPR61Q9BZJ8 451 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 SHPKQ9UHJ6 478 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 DMRT1Q9Y5R6 373 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 ST8SIA3O43173 380 aa15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 HOXD3P31249 432 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 SLURP1P55000 103 aa15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 UBE2MP61081 183 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 ZNF846Q147U1 533 aa15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 BEAN1Q3B7T3 259 aa15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 OR2C3Q8N628 320 aa15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 DCUN1D4Q92564 292 aa15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 DLX4Q92988 240 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 PLEKHA3Q9HB20 300 aa15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 THYN1Q9P016 225 aa15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 F11RQ9Y624 299 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-207ENST00000409417 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.27■□□□□ 0.03
PDLIM2-207ENST00000409417 IFNA17P01571 189 aa15.27■□□□□ 0.03
PDLIM2-207ENST00000409417 TRBV12-3P01733 135 aa15.27■□□□□ 0.03
PDLIM2-207ENST00000409417 PPP1R1AQ13522 171 aa15.27■□□□□ 0.03
PDLIM2-207ENST00000409417 OR1L6Q8NGR2 347 aa15.27■□□□□ 0.03
PDLIM2-207ENST00000409417 GPR146Q96CH1 333 aa15.27■□□□□ 0.03
PDLIM2-207ENST00000409417 PDCD10Q9BUL8 212 aa15.27■□□□□ 0.03
PDLIM2-207ENST00000409417 CACNG5Q9UF02 275 aa15.27■□□□□ 0.03
PDLIM2-207ENST00000409417 INS-IGF2F8WCM5 200 aa15.26■□□□□ 0.03
PDLIM2-207ENST00000409417 SFT2D2O95562 160 aa15.26■□□□□ 0.03
PDLIM2-207ENST00000409417 LYZL2Q7Z4W2 148 aa15.26■□□□□ 0.03
PDLIM2-207ENST00000409417 OR1P1Q8NH06 330 aa15.26■□□□□ 0.03
PDLIM2-207ENST00000409417 OR52E5Q8NH55 327 aa15.26■□□□□ 0.03
PDLIM2-207ENST00000409417 CXorf58Q96LI9 332 aa15.26■□□□□ 0.03
PDLIM2-207ENST00000409417 FLVCR2Q9UPI3 526 aa15.26■□□□□ 0.03
PDLIM2-207ENST00000409417 OVOL1O14753 267 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 MFAP2P55001 183 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 ERHP84090 104 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 DEFA6Q01524 100 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 ANKRD55Q3KP44 614 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 SPINK9Q5DT21 86 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 NMSQ5H8A3 153 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 SLC25A24Q6NUK1 477 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 LRTM2Q8N967 370 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 ZNF114Q8NC26 417 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 EEF1AKMT3Q96AZ1 226 aa15.25■□□□□ 0.03
PDLIM2-207ENST00000409417 SEC14L6B5MCN3 397 aa15.24■□□□□ 0.03
PDLIM2-207ENST00000409417 WIPF1O43516 503 aa15.24■□□□□ 0.03
PDLIM2-207ENST00000409417 SULT1A3P0DMM9 295 aa15.24■□□□□ 0.03
PDLIM2-207ENST00000409417 SULT1A4P0DMN0 295 aa15.24■□□□□ 0.03
PDLIM2-207ENST00000409417 SPCS3P61009 180 aa15.24■□□□□ 0.03
PDLIM2-207ENST00000409417 PDLIM3Q53GG5 364 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-207ENST00000409417 CCDC140Q96MF4 163 aa15.24■□□□□ 0.03
PDLIM2-207ENST00000409417 CACFD1Q9UGQ2 172 aa15.24■□□□□ 0.03
PDLIM2-207ENST00000409417 TRBV7-1A0A0A6YYK4 115 aa15.23■□□□□ 0.03
PDLIM2-207ENST00000409417 DUXBA0A1W2PPF3 345 aa15.23■□□□□ 0.03
PDLIM2-207ENST00000409417 MFSD2BA6NFX1 497 aa15.23■□□□□ 0.03
PDLIM2-207ENST00000409417 BMPR1BO00238 502 aa15.23■□□□□ 0.03
PDLIM2-207ENST00000409417 UPK1BO75841 260 aa15.23■□□□□ 0.03
PDLIM2-207ENST00000409417 KLF5Q13887 457 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-207ENST00000409417 VN1R17PQ8TDU5 208 aa15.23■□□□□ 0.03
PDLIM2-207ENST00000409417 HLA-AP01891 365 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-207ENST00000409417 RPEL1Q2QD12 228 aa15.22■□□□□ 0.03
PDLIM2-207ENST00000409417 C9orf66Q5T8R8 295 aa15.22■□□□□ 0.03
PDLIM2-207ENST00000409417 ZNF502Q8TBZ5 544 aa15.22■□□□□ 0.03
PDLIM2-207ENST00000409417 ENY2Q9NPA8 101 aa15.22■□□□□ 0.03
PDLIM2-207ENST00000409417 TBC1D24Q9ULP9 559 aa15.22■□□□□ 0.03
PDLIM2-207ENST00000409417 S4R3C0 116 aa15.22■□□□□ 0.03
PDLIM2-207ENST00000409417 A0A1B0GU03 582 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 C9orf170A2RU37 121 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 IGHV3-23P01764 117 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 TCRBP04435 133 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 OR4E1P0C645 316 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 ANXA7P20073 488 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 SNCAP37840 140 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 HOXA1P49639 335 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 INSL3P51460 131 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 EGFEM1PQ0D2K5 195 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 DHRS2Q13268 280 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 ASAH1Q13510 395 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 SMCO1Q147U7 214 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 CLEC19AQ6UXS0 136 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 C20orf85Q9H1P6 137 aa15.21■□□□□ 0.03
PDLIM2-207ENST00000409417 CLEC3BP05452 202 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 MZT2BQ6NZ67 158 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 ACSM6Q6P461 480 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 TMED3Q9Y3Q3 217 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 PPP5D1E7EU14 171 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 K7EIM0 57 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 GGCTO75223 188 aaKnown RBP15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 SYNJ2BPP57105 145 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 TATDN3Q17R31 274 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 C4orf46Q504U0 113 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 LYG2Q86SG7 212 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 ATP6V0BQ99437 205 aa15.2■□□□□ 0.02
PDLIM2-207ENST00000409417 FAM240BA0A1B0GVZ2 78 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms