RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 RUNX1Q01196 453 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 TMEM187Q14656 261 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 RBMS2Q15434 407 aaKnown RBP6.44□□□□□ -1.38
BRCC3-205ENST00000399026 C15orf32Q32M92 178 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 CTRB2Q6GPI1 263 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 SLC25A42Q86VD7 318 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 SELENOHQ8IZQ5 122 aaKnown RBP6.44□□□□□ -1.38
BRCC3-205ENST00000399026 SLC35G3Q8N808 338 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 GLYATL2Q8WU03 294 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 DPF1Q92782 380 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 RBPMSQ93062 196 aaKnown RBP6.44□□□□□ -1.38
BRCC3-205ENST00000399026 LSM10Q969L4 123 aaKnown RBP6.44□□□□□ -1.38
BRCC3-205ENST00000399026 SCGB3A2Q96PL1 93 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 TSC22D3Q99576 134 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 BATF3Q9NR55 127 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 NDUFA4L2Q9NRX3 87 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 FBXL7Q9UJT9 491 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 FLVCR2Q9UPI3 526 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 DMRT1Q9Y5R6 373 aa6.44□□□□□ -1.38
BRCC3-205ENST00000399026 IGLV11-55A0A075B6I3 123 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 TRBV9A0A0B4J1U6 114 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 IGHV3-21A0A0B4J1V1 117 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 A0A0B4J293 547 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 NAP1L6A6NFF2 107 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 MFSD2BA6NFX1 497 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 FAM223BA6NKX1 122 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 PPP5D1E7EU14 171 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 PLA2G10O15496 165 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 ST8SIA3O43173 380 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 LYRM1O43325 122 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 B3GALNT1O75752 331 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 NDUFB6O95139 128 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 NDUFB8O95169 186 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 CDS2O95674 445 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 CRYGCP07315 174 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 FGF2P09038 288 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 HOXD3P31249 432 aaPredicted RBP6.43□□□□□ -1.38
BRCC3-205ENST00000399026 HOXA1P49639 335 aaPredicted RBP6.43□□□□□ -1.38
BRCC3-205ENST00000399026 MFAP2P55001 183 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 PRCDQ00LT1 54 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 DHODHQ02127 395 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 ATP5G2Q06055 141 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 PPP1R1AQ13522 171 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 BEAN1Q3B7T3 259 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 THOC7Q6I9Y2 204 aaKnown RBP6.43□□□□□ -1.38
BRCC3-205ENST00000399026 C11orf87Q6NUJ2 197 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 FAM223AQ8IWN6 122 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 CENPSQ8N2Z9 138 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 OR5B3Q8NH48 314 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 DEDD2Q8WXF8 326 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 DCUN1D4Q92564 292 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 DLX4Q92988 240 aaPredicted RBP6.43□□□□□ -1.38
BRCC3-205ENST00000399026 RRNAD1Q96FB5 475 aaKnown RBP6.43□□□□□ -1.38
BRCC3-205ENST00000399026 GALNT14Q96FL9 552 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 RCC1LQ96I51 464 aaKnown RBP6.43□□□□□ -1.38
BRCC3-205ENST00000399026 CCDC140Q96MF4 163 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 CCDC32Q9BV29 185 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 CACNG5Q9UF02 275 aa6.43□□□□□ -1.38
BRCC3-205ENST00000399026 A0A0G2JLM5 398 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 CENPXA8MT69 81 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 SEC14L6B5MCN3 397 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 BMPR1BO00238 502 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 ATG12O94817 140 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 BRI3O95415 125 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 DHFRP00374 187 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 HSPB1P04792 205 aaKnown RBP6.42□□□□□ -1.38
BRCC3-205ENST00000399026 ANXA3P12429 323 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 ANXA7P20073 488 aaKnown RBP6.42□□□□□ -1.38
BRCC3-205ENST00000399026 DEFA6Q01524 100 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 ANKRD55Q3KP44 614 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 ZNF343Q6P1L6 599 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 Q6ZRM9 215 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 LYZL2Q7Z4W2 148 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 HAPLN4Q86UW8 402 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 CADM3Q8N126 398 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 NECAP1Q8NC96 275 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 S100ZQ8WXG8 99 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 GPR146Q96CH1 333 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 USMG5Q96IX5 58 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 TMEM56Q96MV1 263 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 SLC25A21Q9BQT8 299 aaPredicted RBP6.42□□□□□ -1.38
BRCC3-205ENST00000399026 C7orf50Q9BRJ6 194 aaKnown RBP6.42□□□□□ -1.38
BRCC3-205ENST00000399026 SRSF8Q9BRL6 282 aaKnown RBP6.42□□□□□ -1.38
BRCC3-205ENST00000399026 PDCD10Q9BUL8 212 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 WDR12Q9GZL7 423 aaKnown RBP6.42□□□□□ -1.38
BRCC3-205ENST00000399026 C20orf85Q9H1P6 137 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 PLEKHA3Q9HB20 300 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 ZC4H2Q9NQZ6 224 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 TBC1D24Q9ULP9 559 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 F11RQ9Y624 299 aaKnown RBP6.42□□□□□ -1.38
BRCC3-205ENST00000399026 TMEM56-RWDD3S4R434 201 aa6.42□□□□□ -1.38
BRCC3-205ENST00000399026 PRKDCP78527 4128 aaKnown RBP6.42□□□□□ -1.38
BRCC3-205ENST00000399026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.41□□□□□ -1.38
BRCC3-205ENST00000399026 OVOL1O14753 267 aa6.41□□□□□ -1.38
BRCC3-205ENST00000399026 SFT2D2O95562 160 aa6.41□□□□□ -1.38
BRCC3-205ENST00000399026 IFNA17P01571 189 aa6.41□□□□□ -1.38
BRCC3-205ENST00000399026 HLA-AP01891 365 aaKnown RBP6.41□□□□□ -1.38
BRCC3-205ENST00000399026 HIST1H1BP16401 226 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms