RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 LRFN3Q9BTN0 628 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 SCNM1Q9BWG6 230 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 SLC35D1Q9NTN3 355 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 TMEM14BQ9NUH8 114 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 GRIFINA4D1Z8 144 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 A6NNC1 897 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 FCN3O75636 299 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 ZNF25P17030 456 aaPredicted RBP19.42■□□□□ 0.7
PABPN1-202ENST00000397276 NPY1RP25929 384 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 ATP5G3P48201 142 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 ERVFC1-1P60608 527 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 SLC25A48Q6ZT89 311 aaKnown RBP19.42■□□□□ 0.7
PABPN1-202ENST00000397276 NEIL1Q96FI4 390 aaPredicted RBP19.42■□□□□ 0.7
PABPN1-202ENST00000397276 GGTLC1Q9BX51 225 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 TRAPPC1Q9Y5R8 145 aa19.42■□□□□ 0.7
PABPN1-202ENST00000397276 NKX6-3A6NJ46 265 aa19.41■□□□□ 0.7
PABPN1-202ENST00000397276 TBR1Q16650 682 aa19.41■□□□□ 0.7
PABPN1-202ENST00000397276 C1orf159Q96HA4 380 aa19.41■□□□□ 0.7
PABPN1-202ENST00000397276 TNCP24821 2201 aa19.41■□□□□ 0.7
PABPN1-202ENST00000397276 HNF1AP20823 631 aa19.41■□□□□ 0.7
PABPN1-202ENST00000397276 RPL15P61313 204 aaKnown RBP19.41■□□□□ 0.7
PABPN1-202ENST00000397276 LYPD2Q6UXB3 125 aa19.41■□□□□ 0.7
PABPN1-202ENST00000397276 FOXA2Q9Y261 457 aaPredicted RBP19.41■□□□□ 0.7
PABPN1-202ENST00000397276 FAM87AP0C7U9 286 aa19.4■□□□□ 0.7
PABPN1-202ENST00000397276 NPVFQ9HCQ7 196 aa19.4■□□□□ 0.7
PABPN1-202ENST00000397276 J3QR06 171 aa19.4■□□□□ 0.7
PABPN1-202ENST00000397276 TYMSP04818 313 aa19.4■□□□□ 0.7
PABPN1-202ENST00000397276 GNB1P62873 340 aa19.4■□□□□ 0.7
PABPN1-202ENST00000397276 LINC01551Q86U37 167 aa19.4■□□□□ 0.7
PABPN1-202ENST00000397276 CORO2AQ92828 525 aa19.4■□□□□ 0.7
PABPN1-202ENST00000397276 LINC00312Q9Y6C7 94 aa19.4■□□□□ 0.7
PABPN1-202ENST00000397276 PPIAL4EA0A075B759 164 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 ZNF705FA8MVS1 300 aaPredicted RBP19.39■□□□□ 0.7
PABPN1-202ENST00000397276 PPIAL4DF5H284 164 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 M0R143 59 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 NDUFB4O95168 129 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 ZNF705DP0CH99 300 aaPredicted RBP19.39■□□□□ 0.7
PABPN1-202ENST00000397276 ZNF705BP0CI00 300 aaPredicted RBP19.39■□□□□ 0.7
PABPN1-202ENST00000397276 PPIAL4FP0DN26 164 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 OPRK1P41145 380 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 ADTRPQ96IZ2 230 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 DIRC2Q96SL1 478 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 NAGKQ9UJ70 344 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 PPIAL4AQ9Y536 164 aa19.39■□□□□ 0.7
PABPN1-202ENST00000397276 TRGV8A0A0C4DH27 118 aa19.39■□□□□ 0.69
PABPN1-202ENST00000397276 ARL14EPLP0DKL9 152 aa19.39■□□□□ 0.69
PABPN1-202ENST00000397276 SRP14P37108 136 aaKnown RBP19.39■□□□□ 0.69
PABPN1-202ENST00000397276 RAB4BP61018 213 aa19.39■□□□□ 0.69
PABPN1-202ENST00000397276 C1orf194Q5T5A4 169 aa19.39■□□□□ 0.69
PABPN1-202ENST00000397276 MOB3BQ86TA1 216 aa19.39■□□□□ 0.69
PABPN1-202ENST00000397276 TMEM200BQ69YZ2 307 aa19.38■□□□□ 0.69
PABPN1-202ENST00000397276 MS4A10Q96PG2 267 aa19.38■□□□□ 0.69
PABPN1-202ENST00000397276 MPDU1O75352 247 aa19.38■□□□□ 0.69
PABPN1-202ENST00000397276 RTL8BQ17RB0 113 aa19.38■□□□□ 0.69
PABPN1-202ENST00000397276 ZNF705AQ6ZN79 300 aaPredicted RBP19.38■□□□□ 0.69
PABPN1-202ENST00000397276 TBX15Q96SF7 602 aa19.38■□□□□ 0.69
PABPN1-202ENST00000397276 MRPL20Q9BYC9 149 aaKnown RBP19.38■□□□□ 0.69
PABPN1-202ENST00000397276 TLN1Q9Y490 2541 aaKnown RBP19.38■□□□□ 0.69
PABPN1-202ENST00000397276 ARFGEF3Q5TH69 2177 aa19.38■□□□□ 0.69
PABPN1-202ENST00000397276 TMEM178BH3BS89 294 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 TMPRSS3P57727 454 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 SPATA31B1PQ5VZV4 182 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 KCNIP4Q6PIL6 250 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 TEPPQ6URK8 271 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 ZNF714Q96N38 554 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 SEPSECSQ9HD40 501 aaKnown RBP19.37■□□□□ 0.69
PABPN1-202ENST00000397276 IL6RP08887 468 aaPredicted RBP19.37■□□□□ 0.69
PABPN1-202ENST00000397276 DIAPH2-AS1Q14236 149 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 IMMP2LQ96T52 175 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 GAL3ST2Q9H3Q3 398 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 LINC00574Q9H8X3 128 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 PLEKHA3Q9HB20 300 aa19.37■□□□□ 0.69
PABPN1-202ENST00000397276 IGFBP2P18065 325 aa19.36■□□□□ 0.69
PABPN1-202ENST00000397276 RAB4AP20338 218 aa19.36■□□□□ 0.69
PABPN1-202ENST00000397276 ADMP35318 185 aa19.36■□□□□ 0.69
PABPN1-202ENST00000397276 DYNLRB1Q9NP97 96 aa19.36■□□□□ 0.69
PABPN1-202ENST00000397276 TMEM106BQ9NUM4 274 aa19.36■□□□□ 0.69
PABPN1-202ENST00000397276 JKAMPQ9P055 326 aa19.36■□□□□ 0.69
PABPN1-202ENST00000397276 SAA1P0DJI8 122 aaPredicted RBP19.36■□□□□ 0.69
PABPN1-202ENST00000397276 MLANAQ16655 118 aa19.36■□□□□ 0.69
PABPN1-202ENST00000397276 OR10W1Q8NGF6 305 aa19.36■□□□□ 0.69
PABPN1-202ENST00000397276 SGMS2Q8NHU3 365 aa19.36■□□□□ 0.69
PABPN1-202ENST00000397276 LSM4Q9Y4Z0 139 aaKnown RBP19.36■□□□□ 0.69
PABPN1-202ENST00000397276 TRBV20OR9-2A0A075B6H5 130 aa19.35■□□□□ 0.69
PABPN1-202ENST00000397276 UPK2O00526 184 aa19.35■□□□□ 0.69
PABPN1-202ENST00000397276 STPG3Q8N7X2 389 aa19.35■□□□□ 0.69
PABPN1-202ENST00000397276 POLEQ07864 2286 aa19.35■□□□□ 0.69
PABPN1-202ENST00000397276 KIR2DL5BA0A0G2JN68 375 aa19.35■□□□□ 0.69
PABPN1-202ENST00000397276 KIR2DL5BA0A0G2JPC4 375 aa19.35■□□□□ 0.69
PABPN1-202ENST00000397276 TMEM144Q7Z5S9 345 aa19.35■□□□□ 0.69
PABPN1-202ENST00000397276 KIR2DL5AQ8N109 375 aa19.35■□□□□ 0.69
PABPN1-202ENST00000397276 RNASE6Q93091 150 aaKnown RBP19.35■□□□□ 0.69
PABPN1-202ENST00000397276 PRNDQ9UKY0 176 aa19.35■□□□□ 0.69
PABPN1-202ENST00000397276 TEX50A0A1B0GTY4 177 aa19.34■□□□□ 0.69
PABPN1-202ENST00000397276 ACTL6BO94805 426 aa19.34■□□□□ 0.69
PABPN1-202ENST00000397276 ZNF835Q9Y2P0 537 aa19.34■□□□□ 0.69
PABPN1-202ENST00000397276 FOXH1O75593 365 aa19.34■□□□□ 0.69
PABPN1-202ENST00000397276 VENTXO95231 258 aa19.34■□□□□ 0.69
PABPN1-202ENST00000397276 CHRNB4P30926 498 aa19.34■□□□□ 0.69
PABPN1-202ENST00000397276 E7EQL1 145 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms