RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 S100ZQ8WXG8 99 aa16.13■□□□□ 0.17
MAP1LC3A-202ENST00000374837 IL22RA2Q969J5 263 aa16.13■□□□□ 0.17
MAP1LC3A-202ENST00000374837 GPR146Q96CH1 333 aa16.13■□□□□ 0.17
MAP1LC3A-202ENST00000374837 GPR61Q9BZJ8 451 aa16.13■□□□□ 0.17
MAP1LC3A-202ENST00000374837 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.12■□□□□ 0.17
MAP1LC3A-202ENST00000374837 ST8SIA3O43173 380 aa16.12■□□□□ 0.17
MAP1LC3A-202ENST00000374837 ZP3P21754 424 aa16.12■□□□□ 0.17
MAP1LC3A-202ENST00000374837 BTCP35070 178 aa16.12■□□□□ 0.17
MAP1LC3A-202ENST00000374837 MFAP2P55001 183 aa16.12■□□□□ 0.17
MAP1LC3A-202ENST00000374837 SLC25A24Q6NUK1 477 aa16.12■□□□□ 0.17
MAP1LC3A-202ENST00000374837 CCDC32Q9BV29 185 aa16.12■□□□□ 0.17
MAP1LC3A-202ENST00000374837 F11RQ9Y624 299 aaKnown RBP16.12■□□□□ 0.17
MAP1LC3A-202ENST00000374837 S4R3C0 116 aa16.12■□□□□ 0.17
MAP1LC3A-202ENST00000374837 SEC14L6B5MCN3 397 aa16.11■□□□□ 0.17
MAP1LC3A-202ENST00000374837 NDUFB6O95139 128 aa16.11■□□□□ 0.17
MAP1LC3A-202ENST00000374837 IGHV3-23P01764 117 aa16.11■□□□□ 0.17
MAP1LC3A-202ENST00000374837 ANXA3P12429 323 aa16.11■□□□□ 0.17
MAP1LC3A-202ENST00000374837 SPINK9Q5DT21 86 aa16.11■□□□□ 0.17
MAP1LC3A-202ENST00000374837 CENPSQ8N2Z9 138 aa16.11■□□□□ 0.17
MAP1LC3A-202ENST00000374837 OR2C3Q8N628 320 aa16.11■□□□□ 0.17
MAP1LC3A-202ENST00000374837 SLC35G3Q8N808 338 aa16.11■□□□□ 0.17
MAP1LC3A-202ENST00000374837 NOTCH1P46531 2555 aa16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 IFNA17P01571 189 aa16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 PRB2P02812 416 aaPredicted RBP16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 KLF5Q13887 457 aaPredicted RBP16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 C9orf66Q5T8R8 295 aa16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 LYZL2Q7Z4W2 148 aa16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 LGI3Q8N145 548 aa16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 PLEKHA3Q9HB20 300 aa16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 CACNG5Q9UF02 275 aa16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 FLVCR2Q9UPI3 526 aa16.1■□□□□ 0.17
MAP1LC3A-202ENST00000374837 A0A0B4J2A0 478 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 MFSD2BA6NFX1 497 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 BMPR1BO00238 502 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 CYB5BO43169 146 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 VAMP1P23763 118 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 KRTAP10-11P60412 298 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 SRPXP78539 464 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 PPP1R1AQ13522 171 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 AARDQ4LEZ3 155 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 EEF1AKMT3Q96AZ1 226 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 CCDC140Q96MF4 163 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 PDCD10Q9BUL8 212 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 THYN1Q9P016 225 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 SHPKQ9UHJ6 478 aa16.09■□□□□ 0.17
MAP1LC3A-202ENST00000374837 LYRM1O43325 122 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 SFT2D2O95562 160 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ERHP84090 104 aaKnown RBP16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 EGFEM1PQ0D2K5 195 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 RPEL1Q2QD12 228 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ANKRD55Q3KP44 614 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 FAM209BQ5JX69 171 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 CLEC19AQ6UXS0 136 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 OR1L6Q8NGR2 347 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 OR1P1Q8NH06 330 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 CXorf58Q96LI9 332 aa16.08■□□□□ 0.16
MAP1LC3A-202ENST00000374837 PPP5D1E7EU14 171 aa16.07■□□□□ 0.16
MAP1LC3A-202ENST00000374837 INS-IGF2F8WCM5 200 aa16.07■□□□□ 0.16
MAP1LC3A-202ENST00000374837 SYNJ2BPP57105 145 aa16.07■□□□□ 0.16
MAP1LC3A-202ENST00000374837 SPCS3P61009 180 aa16.07■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ACSM6Q6P461 480 aa16.07■□□□□ 0.16
MAP1LC3A-202ENST00000374837 OR52E5Q8NH55 327 aa16.07■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ZNF502Q8TBZ5 544 aa16.07■□□□□ 0.16
MAP1LC3A-202ENST00000374837 VN1R17PQ8TDU5 208 aa16.07■□□□□ 0.16
MAP1LC3A-202ENST00000374837 TRBV7-1A0A0A6YYK4 115 aa16.06■□□□□ 0.16
MAP1LC3A-202ENST00000374837 IGHV3-21A0A0B4J1V1 117 aa16.06■□□□□ 0.16
MAP1LC3A-202ENST00000374837 UBE2MP61081 183 aaKnown RBP16.06■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ZNF846Q147U1 533 aa16.06■□□□□ 0.16
MAP1LC3A-202ENST00000374837 NMSQ5H8A3 153 aa16.06■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ZNF114Q8NC26 417 aa16.06■□□□□ 0.16
MAP1LC3A-202ENST00000374837 WDR12Q9GZL7 423 aaKnown RBP16.06■□□□□ 0.16
MAP1LC3A-202ENST00000374837 GGCTO75223 188 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 HLA-AP01891 365 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 CLEC3BP05452 202 aa16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 SULT1A3P0DMM9 295 aa16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 SULT1A4P0DMN0 295 aa16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 HOXA1P49639 335 aaPredicted RBP16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 INSL3P51460 131 aa16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 LRTM2Q8N967 370 aa16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ENY2Q9NPA8 101 aa16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 AURKAIP1Q9NWT8 199 aaPredicted RBP16.05■□□□□ 0.16
MAP1LC3A-202ENST00000374837 C9orf170A2RU37 121 aa16.04■□□□□ 0.16
MAP1LC3A-202ENST00000374837 K7EIM0 57 aa16.04■□□□□ 0.16
MAP1LC3A-202ENST00000374837 SAP30O75446 220 aa16.04■□□□□ 0.16
MAP1LC3A-202ENST00000374837 OR2C1O95371 312 aa16.04■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ANXA7P20073 488 aaKnown RBP16.04■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ARL3P36405 182 aa16.04■□□□□ 0.16
MAP1LC3A-202ENST00000374837 TATDN3Q17R31 274 aa16.04■□□□□ 0.16
MAP1LC3A-202ENST00000374837 SCARB1Q8WTV0 552 aa16.04■□□□□ 0.16
MAP1LC3A-202ENST00000374837 ELOVL1Q9BW60 279 aa16.04■□□□□ 0.16
MAP1LC3A-202ENST00000374837 PIGBOS1A0A0B4J2F0 54 aa16.03■□□□□ 0.16
MAP1LC3A-202ENST00000374837 DUXBA0A1W2PPF3 345 aa16.03■□□□□ 0.16
MAP1LC3A-202ENST00000374837 SNCAP37840 140 aa16.03■□□□□ 0.16
MAP1LC3A-202ENST00000374837 SMCO1Q147U7 214 aa16.03■□□□□ 0.16
MAP1LC3A-202ENST00000374837 IL34Q6ZMJ4 242 aa16.03■□□□□ 0.16
MAP1LC3A-202ENST00000374837 OR9G4Q8NGQ1 327 aa16.03■□□□□ 0.16
MAP1LC3A-202ENST00000374837 MISP3Q96FF7 219 aa16.03■□□□□ 0.16
MAP1LC3A-202ENST00000374837 TBC1D24Q9ULP9 559 aa16.03■□□□□ 0.16
MAP1LC3A-202ENST00000374837 PRKDCP78527 4128 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms