RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 DNAJC13O75165 2243 aa12.67□□□□□ -0.38
LMNA-201ENST00000347559 GGTLC3B5MD39 225 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 CORTO00230 105 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 WNT9BO14905 357 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 HAND1O96004 215 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 MT-CO3P00414 261 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 EIF4EBP1Q13541 118 aaPredicted RBP12.66□□□□□ -0.38
LMNA-201ENST00000347559 TRIB1Q96RU8 372 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 CDX2Q99626 313 aaPredicted RBP12.66□□□□□ -0.38
LMNA-201ENST00000347559 APOA2P02652 100 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 UQCRFS1P47985 274 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 DCTN5Q9BTE1 182 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 RTL8AQ9BWD3 113 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 FNDC4Q9H6D8 234 aaPredicted RBP12.66□□□□□ -0.38
LMNA-201ENST00000347559 ST20Q9HBF5 79 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 GAGE10A6NGK3 116 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 IGLV2-8P01709 118 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 FOXF2Q12947 444 aa12.66□□□□□ -0.38
LMNA-201ENST00000347559 IGHV1-45A0A0A0MS14 117 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 PPIAL4DF5H284 164 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 GOSR1O95249 250 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 VEGFBP49765 207 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 ZNF826PQ6ZT77 177 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 FAM214BQ7L5A3 538 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 SSX8Q7RTT4 187 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 CHRDL1Q9BU40 450 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 OCIAD1Q9NX40 245 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 RPS20P60866 119 aaKnown RBP12.65□□□□□ -0.38
LMNA-201ENST00000347559 ERVK-16P61578 105 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 GUSBP11Q6P575 273 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 MOB3BQ86TA1 216 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 NUP35Q8NFH5 326 aa12.65□□□□□ -0.38
LMNA-201ENST00000347559 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
LMNA-201ENST00000347559 VDAC2P45880 294 aaPredicted RBP12.64□□□□□ -0.39
LMNA-201ENST00000347559 FAM71F2Q6NXP2 309 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 NABP2Q9BQ15 211 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 TMEM167BQ9NRX6 74 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 POLDIP2Q9Y2S7 368 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 TNRC6AQ8NDV7 1962 aaKnown RBP12.64□□□□□ -0.39
LMNA-201ENST00000347559 OOEPA6NGQ2 149 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 PRSS46E5RG02 174 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 SYS1-DBNDD2H3BUS1 97 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 GPR12P47775 334 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 PEF1Q9UBV8 284 aaKnown RBP12.64□□□□□ -0.39
LMNA-201ENST00000347559 TCF19Q9Y242 345 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 CHTOPQ9Y3Y2 248 aaKnown RBP12.64□□□□□ -0.39
LMNA-201ENST00000347559 C7orf71A4D174 169 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 LEPROTL1O95214 131 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 OR1C1Q15619 314 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 ALKBH6Q3KRA9 238 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 SGK494Q96LW2 274 aa12.64□□□□□ -0.39
LMNA-201ENST00000347559 COX6A1P12074 109 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 PPOXP50336 477 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 CCL7P80098 99 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 EDDM3AQ14507 147 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 MRPL14Q6P1L8 145 aaKnown RBP12.63□□□□□ -0.39
LMNA-201ENST00000347559 Q8TCH9 128 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 NCKAP5O14513 1909 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 CD5LO43866 347 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 MYOD1P15172 320 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 FER1L6-AS1Q8NA97 138 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 OR1B1Q8NGR6 318 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 SNRNP40Q96DI7 357 aaKnown RBP12.63□□□□□ -0.39
LMNA-201ENST00000347559 IMMP1LQ96LU5 166 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 DUSP13Q9UII6 198 aa12.63□□□□□ -0.39
LMNA-201ENST00000347559 TET2Q6N021 2002 aaPredicted RBP12.63□□□□□ -0.39
LMNA-201ENST00000347559 A0A1W2PQM1 296 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 HIGD1CA8MV81 97 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 ARR3P36575 388 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 OR13A1Q8NGR1 328 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 URB1-AS1Q96HZ7 61 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 TMEM191AQ9H0A3 160 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 IGHV5-10-1A0A0J9YXX1 117 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 FAM231BA6NCW3 169 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 FOXE3Q13461 319 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 RPL39P5Q59GN2 51 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 Q8IYB0 196 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 ZNF503Q96F45 646 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 OR2V2Q96R30 315 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 COMMD5Q9GZQ3 224 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 IGLC1P0CG04 106 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 ZNF138P52744 262 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 TCTAP57738 103 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 ZNF146Q15072 292 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 Q6ZR03 302 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 COQ2Q96H96 371 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 ENY2Q9NPA8 101 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 TMEM140Q9NV12 185 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 GNG12Q9UBI6 72 aa12.62□□□□□ -0.39
LMNA-201ENST00000347559 ERVK11-1P61568 191 aa12.61□□□□□ -0.39
LMNA-201ENST00000347559 IGF2BP2-AS1Q96M15 143 aa12.61□□□□□ -0.39
LMNA-201ENST00000347559 TNCP24821 2201 aa12.61□□□□□ -0.39
LMNA-201ENST00000347559 IGHV1-24A0A0C4DH33 117 aa12.61□□□□□ -0.39
LMNA-201ENST00000347559 SS18L1O75177 396 aaPredicted RBP12.61□□□□□ -0.39
LMNA-201ENST00000347559 GPR183P32249 361 aa12.61□□□□□ -0.39
LMNA-201ENST00000347559 DUTP33316 252 aaKnown RBP12.61□□□□□ -0.39
LMNA-201ENST00000347559 ZNF137PP52743 207 aa12.61□□□□□ -0.39
LMNA-201ENST00000347559 C12orf49Q9H741 205 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms