RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 HOXA1P49639 335 aaPredicted RBP9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 SUB1P53999 127 aaKnown RBP eCLIP9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 ATP5G2Q06055 141 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 WT1-ASQ06250 92 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 RGS21Q2M5E4 152 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 C2orf68Q2NKX9 166 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 SLC25A24Q6NUK1 477 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 NECAP1Q8NC96 275 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 OR4F17Q8NGA8 305 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 OR4F4Q96R69 305 aa9.28□□□□□ -0.92
SPTLC1-202ENST00000337841 FAM223BA6NKX1 122 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 INS-IGF2F8WCM5 200 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 MED6O75586 246 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 ADAP1O75689 374 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 PRH1P02810 166 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 SPNP16150 400 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 RHOGP84095 191 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 KIAA0141Q14154 515 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 PDLIM3Q53GG5 364 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 SPINK9Q5DT21 86 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 HIST2H2BDQ6DRA6 164 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 FAM223AQ8IWN6 122 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 OR2C3Q8N628 320 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 KLHL30-AS1Q8NEE0 82 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 MYOZ3Q8TDC0 251 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 HIPK2Q9H2X6 1198 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 HEYLQ9NQ87 328 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 FBXL7Q9UJT9 491 aa9.27□□□□□ -0.93
SPTLC1-202ENST00000337841 TRBV9A0A0B4J1U6 114 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 FAM90A26D6RGX4 464 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 PITX3O75364 302 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 OR2J3O76001 311 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 TNFRSF9Q07011 255 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 NOXA1Q86UR1 476 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 OR1P1Q8NH06 330 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 C4orf3Q8WVX3 66 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 GSKIPQ9P0R6 139 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 HSPB7Q9UBY9 170 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 KLK9Q9UKQ9 250 aa9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 F11RQ9Y624 299 aaKnown RBP9.26□□□□□ -0.93
SPTLC1-202ENST00000337841 PLXNB1O43157 2135 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 IGLV11-55A0A075B6I3 123 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 C5orf51A6NDU8 294 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 FAM25EA8MYX2 175 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 LY86O95711 162 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 IGHV3-11P01762 117 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 MYCNOSP40205 109 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 HTR2BP41595 481 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 RUNX1Q01196 453 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 IAH1Q2TAA2 248 aaPredicted RBP9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 FAM209BQ5JX69 171 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 GSG1LQ6UXU4 331 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 OR1N2Q8NGR9 330 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 DPF1Q92782 380 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 CXorf58Q96LI9 332 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 FANCD2OSQ96PS1 177 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 OR5B12Q96R08 314 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 P2RX4Q99571 388 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 RBKSQ9H477 322 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 GNB4Q9HAV0 340 aa9.25□□□□□ -0.93
SPTLC1-202ENST00000337841 TNCP24821 2201 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 CCL24O00175 119 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 WRBO00258 174 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 SSNA1O43805 119 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 NXPH3O95157 252 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 NDUFB8O95169 186 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 PF4P02776 101 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 LGALS1P09382 135 aaKnown RBP9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 NKX2-1P43699 371 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 ATP5IP56385 69 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 ID3Q02535 119 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 C15orf32Q32M92 178 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 C18orf65Q6ZTR6 163 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 C8orf86Q6ZUL3 223 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 ZNF114Q8NC26 417 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 DTD1Q8TEA8 209 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 EEF1AKMT3Q96AZ1 226 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 OR10C1Q96KK4 312 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 CIB3Q96Q77 187 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 RANGRFQ9HD47 186 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 U3KQ87 197 aa9.24□□□□□ -0.93
SPTLC1-202ENST00000337841 MPTX1A8MV57 137 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 I3L521 148 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 CORTO00230 105 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 SYNGR2O43760 224 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 IFNA10P01566 189 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 HSPB1P04792 205 aaKnown RBP9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 RPP30P78346 268 aaKnown RBP9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 TATDN3Q17R31 274 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 ZNF343Q6P1L6 599 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 C19orf35Q6ZS72 473 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 ZBTB8BQ8NAP8 495 aaPredicted RBP9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 OR11H1Q8NG94 326 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 VN1R17PQ8TDU5 208 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 MISP3Q96FF7 219 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 C2orf50Q96LR7 162 aa9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 PEF1Q9UBV8 284 aaKnown RBP9.23□□□□□ -0.93
SPTLC1-202ENST00000337841 TRBV7-1A0A0A6YYK4 115 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms