RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 P0C879 139 aa12.19□□□□□ -0.46
MRPL55-202ENST00000336300 VAMP1P23763 118 aa12.19□□□□□ -0.46
MRPL55-202ENST00000336300 UBE2MP61081 183 aaKnown RBP12.19□□□□□ -0.46
MRPL55-202ENST00000336300 DEFA5Q01523 94 aa12.19□□□□□ -0.46
MRPL55-202ENST00000336300 DEFA6Q01524 100 aa12.19□□□□□ -0.46
MRPL55-202ENST00000336300 ZNF846Q147U1 533 aa12.19□□□□□ -0.46
MRPL55-202ENST00000336300 KLK9Q2XQG4 91 aa12.19□□□□□ -0.46
MRPL55-202ENST00000336300 C9orf66Q5T8R8 295 aa12.19□□□□□ -0.46
MRPL55-202ENST00000336300 FANCD2OSQ96PS1 177 aa12.19□□□□□ -0.46
MRPL55-202ENST00000336300 KLK9Q9UKQ9 250 aa12.19□□□□□ -0.46
MRPL55-202ENST00000336300 IGLV11-55A0A075B6I3 123 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 TRBV7-1A0A0A6YYK4 115 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 A0A0B4J2A0 478 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 SEC14L6B5MCN3 397 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 NDUFB8O95169 186 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 HOXD3P31249 432 aaPredicted RBP12.18□□□□□ -0.46
MRPL55-202ENST00000336300 SNCAP37840 140 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 INSL3P51460 131 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 SUB1P53999 127 aaKnown RBP eCLIP12.18□□□□□ -0.46
MRPL55-202ENST00000336300 SLURP1P55000 103 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 SUPT4H1P63272 117 aaKnown RBP12.18□□□□□ -0.46
MRPL55-202ENST00000336300 IZUMO4Q1ZYL8 232 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 RPEL1Q2QD12 228 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 BEAN1Q3B7T3 259 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 C19orf35Q6ZS72 473 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 LHFPL5Q8TAF8 219 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 DCUN1D4Q92564 292 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 DLX4Q92988 240 aaPredicted RBP12.18□□□□□ -0.46
MRPL55-202ENST00000336300 ELOVL1Q9BW60 279 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 SHPKQ9UHJ6 478 aa12.18□□□□□ -0.46
MRPL55-202ENST00000336300 F11RQ9Y624 299 aaKnown RBP12.18□□□□□ -0.46
MRPL55-202ENST00000336300 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.17□□□□□ -0.46
MRPL55-202ENST00000336300 DUXBA0A1W2PPF3 345 aa12.17□□□□□ -0.46
MRPL55-202ENST00000336300 ST8SIA3O43173 380 aa12.17□□□□□ -0.46
MRPL55-202ENST00000336300 LYRM1O43325 122 aa12.17□□□□□ -0.46
MRPL55-202ENST00000336300 KPRPQ5T749 579 aaPredicted RBP12.17□□□□□ -0.46
MRPL55-202ENST00000336300 OR1P1Q8NH06 330 aa12.17□□□□□ -0.46
MRPL55-202ENST00000336300 OR52E5Q8NH55 327 aa12.17□□□□□ -0.46
MRPL55-202ENST00000336300 GPR146Q96CH1 333 aa12.17□□□□□ -0.46
MRPL55-202ENST00000336300 NOTCH3Q9UM47 2321 aa12.17□□□□□ -0.46
MRPL55-202ENST00000336300 SFT2D2O95562 160 aa12.16□□□□□ -0.46
MRPL55-202ENST00000336300 SULT1A3P0DMM9 295 aa12.16□□□□□ -0.46
MRPL55-202ENST00000336300 SULT1A4P0DMN0 295 aa12.16□□□□□ -0.46
MRPL55-202ENST00000336300 HOXA1P49639 335 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-202ENST00000336300 SPCS3P61009 180 aa12.16□□□□□ -0.46
MRPL55-202ENST00000336300 MZT2BQ6NZ67 158 aa12.16□□□□□ -0.46
MRPL55-202ENST00000336300 REC114Q7Z4M0 266 aa12.16□□□□□ -0.46
MRPL55-202ENST00000336300 OR2C3Q8N628 320 aa12.16□□□□□ -0.46
MRPL55-202ENST00000336300 VN1R17PQ8TDU5 208 aa12.16□□□□□ -0.46
MRPL55-202ENST00000336300 CACNG5Q9UF02 275 aa12.16□□□□□ -0.46
MRPL55-202ENST00000336300 A0A0G2JRQ6 117 aa12.15□□□□□ -0.46
MRPL55-202ENST00000336300 INS-IGF2F8WCM5 200 aa12.15□□□□□ -0.46
MRPL55-202ENST00000336300 PLA2G10O15496 165 aa12.15□□□□□ -0.46
MRPL55-202ENST00000336300 GGCTO75223 188 aaKnown RBP12.15□□□□□ -0.46
MRPL55-202ENST00000336300 PPP1R1AQ13522 171 aa12.15□□□□□ -0.46
MRPL55-202ENST00000336300 Q6ZRM9 215 aa12.15□□□□□ -0.46
MRPL55-202ENST00000336300 LYZL2Q7Z4W2 148 aa12.15□□□□□ -0.46
MRPL55-202ENST00000336300 ZNF114Q8NC26 417 aa12.15□□□□□ -0.46
MRPL55-202ENST00000336300 OR4C12Q96R67 309 aa12.15□□□□□ -0.46
MRPL55-202ENST00000336300 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
MRPL55-202ENST00000336300 NOTCH1P46531 2555 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 SAP30O75446 220 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 IGHV3-23P01764 117 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 HLA-AP01891 365 aaKnown RBP12.14□□□□□ -0.47
MRPL55-202ENST00000336300 CLEC3BP05452 202 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 ARL3P36405 182 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 KLF5Q13887 457 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-202ENST00000336300 SMCO1Q147U7 214 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 AARDQ4LEZ3 155 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 C4orf46Q504U0 113 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 SPINK9Q5DT21 86 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 CLEC19AQ6UXS0 136 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 LRTM2Q8N967 370 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 COQ8AQ8NI60 647 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 PEMTQ9UBM1 199 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 TMED3Q9Y3Q3 217 aa12.14□□□□□ -0.47
MRPL55-202ENST00000336300 A0A1B0GU03 582 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 FAM240BA0A1B0GVZ2 78 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 CEBPZOSA8MTT3 80 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 TRBV12-3P01733 135 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 OR4E1P0C645 316 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 BTCP35070 178 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 SYNJ2BPP57105 145 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 ACSM6Q6P461 480 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 OR1S1Q8NH92 325 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 MISP3Q96FF7 219 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 ATP6V0BQ99437 205 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 HIPK2Q9H2X6 1198 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 HEYLQ9NQ87 328 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-202ENST00000336300 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
MRPL55-202ENST00000336300 C21orf62Q9NYP8 219 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 FLVCR2Q9UPI3 526 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 S4R3C0 116 aa12.13□□□□□ -0.47
MRPL55-202ENST00000336300 C9orf170A2RU37 121 aa12.12□□□□□ -0.47
MRPL55-202ENST00000336300 MFSD2BA6NFX1 497 aa12.12□□□□□ -0.47
MRPL55-202ENST00000336300 PPP5D1E7EU14 171 aa12.12□□□□□ -0.47
MRPL55-202ENST00000336300 CORTO00230 105 aa12.12□□□□□ -0.47
MRPL55-202ENST00000336300 BMPR1BO00238 502 aa12.12□□□□□ -0.47
MRPL55-202ENST00000336300 WIPF1O43516 503 aa12.12□□□□□ -0.47
MRPL55-202ENST00000336300 UPK1BO75841 260 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms