RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 C4orf46Q504U0 113 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 SPINK9Q5DT21 86 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 GGNBP1Q5YKI7 109 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 H2BFWTQ7Z2G1 175 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 LGI3Q8N145 548 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 RNF152Q8N8N0 203 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 C11orf44Q8N8P7 122 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 LFNGQ8NES3 379 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 VSTM2AQ8TAG5 236 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 ENKURQ8TC29 256 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 MYOZ3Q8TDC0 251 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 MITD1Q8WV92 249 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 LSM10Q969L4 123 aaKnown RBP4.59□□□□□ -1.67
SSX3-201ENST00000298396 CITED1Q99966 193 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 KLK15Q9H2R5 256 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 NDUFA4L2Q9NRX3 87 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 CACNG5Q9UF02 275 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 SHPKQ9UHJ6 478 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 OR51B2Q9Y5P1 312 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 A0A1B0GUS0 222 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 DUXBA0A1W2PPF3 345 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 C7orf66A4D0T2 115 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 PSMB11A5LHX3 300 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 CCSO14618 274 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 NXPH3O95157 252 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 CNIH1O95406 144 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 DUS4LO95620 317 aaKnown RBP4.58□□□□□ -1.68
SSX3-201ENST00000298396 LY86O95711 162 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 PRH1P02810 166 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 HOXB5P09067 269 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 HOXA5P20719 270 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 VDAC1P21796 283 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 PSMB8P28062 276 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 AKR1C2P52895 323 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 DEFA1P59665 94 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 DEFA3P59666 94 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 PRCDQ00LT1 54 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 OXA1LQ15070 435 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 KLK9Q2XQG4 91 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 PDLIM3Q53GG5 364 aaPredicted RBP4.58□□□□□ -1.68
SSX3-201ENST00000298396 AKIRIN2Q53H80 203 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 UNQ5815/PRO19632Q6UWF5 114 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 ZNF429Q86V71 674 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 ZNF695Q8IW36 515 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 TTC9CQ8N5M4 171 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 OR5T1Q8NG75 326 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 OR5AU1Q8NGC0 362 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 SPATA3Q8NHX4 192 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 FAM110DQ8TAY7 271 aaPredicted RBP4.58□□□□□ -1.68
SSX3-201ENST00000298396 ZNF431Q8TF32 576 aaPredicted RBP4.58□□□□□ -1.68
SSX3-201ENST00000298396 ABHD5Q8WTS1 349 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 CHPT1Q8WUD6 406 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 TMEM170AQ8WVE7 144 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 OR10C1Q96KK4 312 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 FYTTD1Q96QD9 318 aaKnown RBP4.58□□□□□ -1.68
SSX3-201ENST00000298396 CITED2Q99967 270 aaPredicted RBP4.58□□□□□ -1.68
SSX3-201ENST00000298396 ZNF747Q9BV97 191 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 KLK9Q9UKQ9 250 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 PRNDQ9UKY0 176 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 KCNIP3Q9Y2W7 256 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 SORL1Q92673 2214 aa4.58□□□□□ -1.68
SSX3-201ENST00000298396 TRBV9A0A0B4J1U6 114 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 A0A1W2PN81 502 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 NPIPB5A8MRT5 1133 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 CRYGCP07315 174 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 TRAPPC2P0DI81 140 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 TRAPPC2BP0DI82 140 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 SULT1A3P0DMM9 295 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 SULT1A4P0DMN0 295 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 ANXA3P12429 323 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 CTRB1P17538 263 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 PSMB6P28072 239 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 CHRNA7P36544 502 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 HSPE1P61604 102 aaKnown RBP4.57□□□□□ -1.68
SSX3-201ENST00000298396 SRPXP78539 464 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 CD69Q07108 199 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 FOXE3Q13461 319 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 SMCO1Q147U7 214 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 TATDN3Q17R31 274 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 BSXQ3C1V8 233 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 CTRB2Q6GPI1 263 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 PLET1Q6UQ28 207 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 CENPVQ7Z7K6 275 aaPredicted RBP4.57□□□□□ -1.68
SSX3-201ENST00000298396 C12orf45Q8N5I9 185 aaPredicted RBP4.57□□□□□ -1.68
SSX3-201ENST00000298396 OR2C3Q8N628 320 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 OR4D5Q8NGN0 318 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 OR1L8Q8NGR8 309 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 OR4A16Q8NH70 328 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 ZNF414Q96IQ9 312 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 C20orf173Q96LM9 149 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 AIFM2Q9BRQ8 373 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 GNB4Q9HAV0 340 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 COA4Q9NYJ1 87 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 HSPB7Q9UBY9 170 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 ZNF257Q9Y2Q1 563 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 ALG5Q9Y673 324 aa4.57□□□□□ -1.68
SSX3-201ENST00000298396 IGLV11-55A0A075B6I3 123 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 A0A1B0GU03 582 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 SNRPGP15A8MWD9 76 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms