RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ZNF355PQ9NSJ1 428 aa11.02□□□□□ -0.64
TNFRSF21-201ENST00000296861 OPRK1P41145 380 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 SELENOVP59797 346 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 EFNB3Q15768 340 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 SPRNQ5BIV9 151 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 STUMQ69YW2 141 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 AGMATQ9BSE5 352 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 KCNIP2Q9NS61 270 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 ATRXP46100 2492 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 VENTXO95231 258 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 CD24P25063 80 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 LCN2P80188 198 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 Q8NFD4 153 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 TIMM9Q9Y5J7 89 aa11.02□□□□□ -0.65
TNFRSF21-201ENST00000296861 DYSFO75923 2080 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 ADGRG4Q8IZF6 3080 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 DLEU1O43261 78 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 ZNF134P52741 427 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 KRTAP27-1Q3LI81 207 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 Q6ZWC4 215 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 FAM216BQ8N7L0 139 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 FDCSPQ8NFU4 85 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 NABP2Q9BQ15 211 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 MBNL3Q9NUK0 354 aaKnown RBP11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 OR51B2Q9Y5P1 312 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 USF1P22415 310 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 CHRNB4P30926 498 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 SPATA45Q537H7 98 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 C10orf55Q5SWW7 151 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 SLC35E4Q6ICL7 350 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 C9orf106Q8NAJ2 232 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 DIRC2Q96SL1 478 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 MCRIP2Q9BUT9 160 aaKnown RBP11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 CALYQ9NYX4 217 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 M0QZK8 103 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 SP9P0CG40 484 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 OR4A47Q6IF82 309 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 HCP5Q6MZN7 132 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 KIR3DL3Q8N743 410 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 ZBTB34Q8NCN2 500 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 OR5B3Q8NH48 314 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 OR4S2Q8NH73 311 aa11.01□□□□□ -0.65
TNFRSF21-201ENST00000296861 PYYP10082 97 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 PMCHL1Q16048 86 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 OR2T6Q8NHC8 308 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 ASCL2Q99929 193 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 GNB4Q9HAV0 340 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 PROCRQ9UNN8 238 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 ARL2-SNX15V9GYD0 113 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 SMG1Q96Q15 3661 aaKnown RBP11□□□□□ -0.65
TNFRSF21-201ENST00000296861 AHRRA9YTQ3 701 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 RAB4AP20338 218 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 MORN2Q502X0 79 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 PEAR1Q5VY43 1037 aaPredicted RBP11□□□□□ -0.65
TNFRSF21-201ENST00000296861 GMPPAQ96IJ6 420 aaPredicted RBP11□□□□□ -0.65
TNFRSF21-201ENST00000296861 RNF24Q9Y225 148 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 OTOGLQ3ZCN5 2332 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 TRGV10A0A0A0MS01 117 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 M0QZ24 198 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 DLX1P56177 255 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 GABRA6Q16445 453 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 IBA57Q5T440 356 aaKnown RBP11□□□□□ -0.65
TNFRSF21-201ENST00000296861 CCL17Q92583 94 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 ZNF835Q9Y2P0 537 aa11□□□□□ -0.65
TNFRSF21-201ENST00000296861 A0A1W2PNU3 283 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF21-201ENST00000296861 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
TNFRSF21-201ENST00000296861 COX7A2P2O60397 106 aa10.99□□□□□ -0.65
TNFRSF21-201ENST00000296861 NRN1LQ496H8 165 aa10.99□□□□□ -0.65
TNFRSF21-201ENST00000296861 SPAARA0A1B0GVQ0 90 aa10.99□□□□□ -0.65
TNFRSF21-201ENST00000296861 GFRA3O60609 400 aa10.99□□□□□ -0.65
TNFRSF21-201ENST00000296861 SRSF7Q16629 238 aaKnown RBP eCLIP10.99□□□□□ -0.657e-7■■□□□ 13.6
TNFRSF21-201ENST00000296861 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
TNFRSF21-201ENST00000296861 SAA2-SAA4A0A096LPE2 208 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 IGKV1-16P04430 117 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 ADH4P08319 380 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 CYC1P08574 325 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 SAA2P0DJI9 122 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 PTTG1IPP53801 180 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 GNG5P63218 68 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 WFDC8Q8IUA0 241 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 EAF1Q96JC9 268 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 PMCHL2Q9BQD1 86 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.98□□□□□ -0.653e-7■■■□□ 19.1
TNFRSF21-201ENST00000296861 TRBV6-6A0A0A6YYG2 114 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 K7EN84 100 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 ERVK11-1P61568 191 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 UBE2G1P62253 170 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 LEMD1Q68G75 181 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 SP5Q6BEB4 398 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 IL36BQ9NZH7 164 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 MOSP00540 346 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 STAG3L2P0CL84 134 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 STAG3L3P0CL85 134 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 BRS3P32247 399 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 RAB7AP51149 207 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 PAFAH1B2P68402 229 aa10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 INO80CQ6PI98 192 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF21-201ENST00000296861 OR10X1Q8NGY0 326 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms