RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MGST3O14880 152 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 PRR20EP86478 221 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 PRR20CP86479 221 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 PRR20DP86480 221 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 PRR20BP86481 221 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 PRR20AP86496 221 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 LINC00479Q96M42 142 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 FER1L6-AS2Q96M78 137 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 RBM14Q96PK6 669 aaKnown RBP14.32□□□□□ -0.12
TRAM1-201ENST00000262213 TXN2Q99757 166 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 IDI2-AS1Q9NZ38 188 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 TECTAO75443 2155 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 TRGV8A0A0C4DH27 118 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 CX3CL1P78423 397 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 DHRS13Q6UX07 377 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 C11orf42Q8N5U0 333 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 DEFB108BQ8NET1 73 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 ZNF503Q96F45 646 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 SLC45A2Q9UMX9 530 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 IGKV1OR2-108A0A075B7D4 117 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 RAB7AP51149 207 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 MSMPQ1L6U9 139 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 IBA57Q5T440 356 aaKnown RBP14.31□□□□□ -0.12
TRAM1-201ENST00000262213 C1orf210Q8IVY1 113 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 GCSAMQ8N6F7 178 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 OR4B1Q8NGF8 309 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 OR9G1Q8NH87 305 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 KCNS1Q96KK3 526 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 RNF2Q99496 336 aa14.31□□□□□ -0.12
TRAM1-201ENST00000262213 TRAV5A0A0B4J249 113 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 IGHV2OR16-5A0A0B4J2B6 119 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 J3QR06 171 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 AREGP15514 252 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 MAJINQ3KP22 176 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 Q6ZN92 141 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 C9orf106Q8NAJ2 232 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 DDB2Q92466 427 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 TUBG2Q9NRH3 451 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 CLCF1Q9UBD9 225 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 DSCAMO60469 2012 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 BMPR1BO00238 502 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 SPRY3O43610 288 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 KIR2DL2P43627 348 aaPredicted RBP14.3□□□□□ -0.12
TRAM1-201ENST00000262213 FAM168AQ92567 244 aa14.3□□□□□ -0.12
TRAM1-201ENST00000262213 TECRQ9NZ01 308 aaKnown RBP14.3□□□□□ -0.12
TRAM1-201ENST00000262213 SRRM5B3KS81 715 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 TCF21O43680 179 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 CHRNB4P30926 498 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 MRPS11P82912 194 aaKnown RBP14.29□□□□□ -0.12
TRAM1-201ENST00000262213 LCN12Q6JVE5 192 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 WDR73Q6P4I2 378 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 C1orf174Q8IYL3 243 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 TMEM178AQ8NBL3 297 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 PPP1R35Q8TAP8 253 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 OR2V2Q96R30 315 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 TMEM167BQ9NRX6 74 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 TMEM14BQ9NUH8 114 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 CDC42EP3Q9UKI2 254 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 LY96Q9Y6Y9 160 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 TRBV9A0A0B4J1U6 114 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 IGHV1-18A0A0C4DH31 117 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 SIAH2O43255 324 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 C3orf79P0CE67 100 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 COL5A1-AS1Q5SY13 56 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 NEUROG1Q92886 237 aa14.29□□□□□ -0.12
TRAM1-201ENST00000262213 USF1P22415 310 aaPredicted RBP14.28□□□□□ -0.12
TRAM1-201ENST00000262213 KIR2DS2P43631 304 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 RPL19P84098 196 aaKnown RBP14.28□□□□□ -0.12
TRAM1-201ENST00000262213 FOXA2Q9Y261 457 aaPredicted RBP14.28□□□□□ -0.12
TRAM1-201ENST00000262213 ZNF324O75467 553 aaPredicted RBP14.28□□□□□ -0.12
TRAM1-201ENST00000262213 IGHV3-48P01763 117 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 AMY1AP04745 511 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 MORN5Q5VZ52 161 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 STPG4Q8N801 248 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 OR10W1Q8NGF6 305 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 RND1Q92730 232 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 SLC35D1Q9NTN3 355 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 F2RL2O00254 374 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 APCSP02743 223 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 IGKV1-16P04430 117 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 Q6ZVH6 145 aa14.28□□□□□ -0.12
TRAM1-201ENST00000262213 LNP1A1A4G5 178 aa14.27□□□□□ -0.12
TRAM1-201ENST00000262213 MT-ND6P03923 174 aa14.27□□□□□ -0.12
TRAM1-201ENST00000262213 HNRNPA3P51991 378 aaKnown RBP14.27□□□□□ -0.12
TRAM1-201ENST00000262213 SLAQ13239 276 aa14.27□□□□□ -0.12
TRAM1-201ENST00000262213 C17orf58Q2M2W7 97 aa14.27□□□□□ -0.12
TRAM1-201ENST00000262213 PRR27Q6MZM9 219 aa14.27□□□□□ -0.12
TRAM1-201ENST00000262213 OSTCQ9NRP0 149 aa14.27□□□□□ -0.12
TRAM1-201ENST00000262213 DPRXA6NFQ7 191 aa14.27□□□□□ -0.13
TRAM1-201ENST00000262213 IGLV2-8P01709 118 aa14.27□□□□□ -0.13
TRAM1-201ENST00000262213 CCL11P51671 97 aa14.27□□□□□ -0.13
TRAM1-201ENST00000262213 NIT1Q86X76 327 aa14.27□□□□□ -0.13
TRAM1-201ENST00000262213 TSKUQ8WUA8 353 aa14.27□□□□□ -0.13
TRAM1-201ENST00000262213 BORCS7Q96B45 105 aa14.27□□□□□ -0.13
TRAM1-201ENST00000262213 DNAJC4Q9NNZ3 241 aa14.27□□□□□ -0.13
TRAM1-201ENST00000262213 MAP1BP46821 2468 aaKnown RBP14.26□□□□□ -0.13
TRAM1-201ENST00000262213 HYPMO75409 117 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 OR5G3P0C626 314 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 GAGE1Q13065 139 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 OR10J3Q5JRS4 329 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms