RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HLA-DRB5Q30154 266 aa16.54■□□□□ 0.24
SYNGAP1-227ENST00000638142 CT45A1Q5HYN5 189 aa16.54■□□□□ 0.24
SYNGAP1-227ENST00000638142 TEX43Q6ZNM6 134 aa16.54■□□□□ 0.24
SYNGAP1-227ENST00000638142 OR4P4Q8NGL7 312 aa16.54■□□□□ 0.24
SYNGAP1-227ENST00000638142 CT45A3Q8NHU0 189 aa16.54■□□□□ 0.24
SYNGAP1-227ENST00000638142 NEUROG1Q92886 237 aa16.54■□□□□ 0.24
SYNGAP1-227ENST00000638142 ADTRPQ96IZ2 230 aa16.54■□□□□ 0.24
SYNGAP1-227ENST00000638142 EAF1Q96JC9 268 aaPredicted RBP16.54■□□□□ 0.24
SYNGAP1-227ENST00000638142 OR2V2Q96R30 315 aa16.54■□□□□ 0.24
SYNGAP1-227ENST00000638142 BDP1A6H8Y1 2624 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 CBLN1P23435 193 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 CCL11P51671 97 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 MSMPQ1L6U9 139 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 Q6ZWC4 215 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 FDCSPQ8NFU4 85 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 MRPL18Q9H0U6 180 aaKnown RBP16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 SLC25A15Q9Y619 301 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 GRIFINA4D1Z8 144 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 FOXH1O75593 365 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 TNFSF13O75888 250 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 LGALS4P56470 323 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 POU2AF1Q16633 256 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 MOGAT3Q86VF5 341 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 LRP11Q86VZ4 500 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 IDI2-AS1Q9NZ38 188 aa16.53■□□□□ 0.24
SYNGAP1-227ENST00000638142 TRAV17A0A0B4J275 112 aa16.52■□□□□ 0.24
SYNGAP1-227ENST00000638142 SLC17A3O00476 420 aa16.52■□□□□ 0.24
SYNGAP1-227ENST00000638142 LHBP01229 141 aa16.52■□□□□ 0.24
SYNGAP1-227ENST00000638142 CRISP2P16562 243 aa16.52■□□□□ 0.24
SYNGAP1-227ENST00000638142 IGFBP2P18065 325 aa16.52■□□□□ 0.24
SYNGAP1-227ENST00000638142 TPTE2P1Q5T6R2 138 aa16.52■□□□□ 0.24
SYNGAP1-227ENST00000638142 LEAP2Q969E1 77 aa16.52■□□□□ 0.24
SYNGAP1-227ENST00000638142 STARD4Q96DR4 205 aa16.52■□□□□ 0.24
SYNGAP1-227ENST00000638142 CGAP01215 116 aa16.52■□□□□ 0.23
SYNGAP1-227ENST00000638142 LINC00310P59036 64 aa16.52■□□□□ 0.23
SYNGAP1-227ENST00000638142 RANP62826 216 aaKnown RBP16.52■□□□□ 0.23
SYNGAP1-227ENST00000638142 RPEL1Q2QD12 228 aa16.52■□□□□ 0.23
SYNGAP1-227ENST00000638142 IGFL2Q6UWQ7 119 aa16.52■□□□□ 0.23
SYNGAP1-227ENST00000638142 TMEM167BQ9NRX6 74 aa16.52■□□□□ 0.23
SYNGAP1-227ENST00000638142 TRBV9A0A0B4J1U6 114 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 KBTBD11-OT1A0A1B0GTJ5 212 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 AHRRA9YTQ3 701 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 LINC00869P0C866 280 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 ZNF25P17030 456 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 UTF1Q5T230 341 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 TOMM20LQ6UXN7 152 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 ZNF705AQ6ZN79 300 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 MIEN1Q9BRT3 115 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 PRNDQ9UKY0 176 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 SLC45A2Q9UMX9 530 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 MRPS11P82912 194 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 OR1L6Q8NGR2 347 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 OR51B2Q9Y5P1 312 aa16.51■□□□□ 0.23
SYNGAP1-227ENST00000638142 NKX2-8O15522 239 aa16.5■□□□□ 0.23
SYNGAP1-227ENST00000638142 RPLP1P05386 114 aaKnown RBP16.5■□□□□ 0.23
SYNGAP1-227ENST00000638142 MIR17HGQ75NE6 70 aa16.5■□□□□ 0.23
SYNGAP1-227ENST00000638142 MMD2Q8IY49 270 aa16.5■□□□□ 0.23
SYNGAP1-227ENST00000638142 PARD6AQ9NPB6 346 aa16.5■□□□□ 0.23
SYNGAP1-227ENST00000638142 ZNF257Q9Y2Q1 563 aa16.5■□□□□ 0.23
SYNGAP1-227ENST00000638142 HEATR1Q9H583 2144 aaKnown RBP16.5■□□□□ 0.23
SYNGAP1-227ENST00000638142 SPRNQ5BIV9 151 aa16.5■□□□□ 0.23
SYNGAP1-227ENST00000638142 V9GYV3 84 aa16.5■□□□□ 0.23
SYNGAP1-227ENST00000638142 FCN1O00602 326 aa16.49■□□□□ 0.23
SYNGAP1-227ENST00000638142 SERF1AO75920 110 aa16.49■□□□□ 0.23
SYNGAP1-227ENST00000638142 OR10J4P0C629 311 aa16.49■□□□□ 0.23
SYNGAP1-227ENST00000638142 KLF3P57682 345 aaPredicted RBP16.49■□□□□ 0.23
SYNGAP1-227ENST00000638142 LYG1Q8N1E2 194 aa16.49■□□□□ 0.23
SYNGAP1-227ENST00000638142 DKK4Q9UBT3 224 aa16.49■□□□□ 0.23
SYNGAP1-227ENST00000638142 IL19Q9UHD0 177 aa16.49■□□□□ 0.23
SYNGAP1-227ENST00000638142 GNG4P50150 75 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 RPL19P84098 196 aaKnown RBP16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 Q0VG73 95 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 PSG5Q15238 335 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 TMEM183BQ1AE95 376 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 KRTCAP3Q53RY4 240 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 FAM222BQ8WU58 562 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 SLC35E1Q96K37 410 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 NABP2Q9BQ15 211 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 HINT2Q9BX68 163 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 PLEKHA3Q9HB20 300 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 HELTA6NFD8 242 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 ACTL6BO94805 426 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 CD33P20138 364 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 ATP5IP56385 69 aaPredicted RBP16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 PRCDQ00LT1 54 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 CENPWQ5EE01 88 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 ZNF439Q8NDP4 499 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 ITLN1Q8WWA0 313 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 HSPB9Q9BQS6 159 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 GNB1LQ9BYB4 327 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 PPP1R14DQ9NXH3 145 aa16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 TECRQ9NZ01 308 aaKnown RBP16.48■□□□□ 0.23
SYNGAP1-227ENST00000638142 J3QR06 171 aa16.47■□□□□ 0.23
SYNGAP1-227ENST00000638142 GLRXP35754 106 aa16.47■□□□□ 0.23
SYNGAP1-227ENST00000638142 IER3P46695 156 aa16.47■□□□□ 0.23
SYNGAP1-227ENST00000638142 ZNF83P51522 516 aa16.47■□□□□ 0.23
SYNGAP1-227ENST00000638142 GAGE1Q13065 139 aa16.47■□□□□ 0.23
SYNGAP1-227ENST00000638142 INTS1Q8N201 2190 aaKnown RBP16.47■□□□□ 0.23
SYNGAP1-227ENST00000638142 SNURFLB1AK76 121 aa16.47■□□□□ 0.23
SYNGAP1-227ENST00000638142 TDRG1Q3Y452 100 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms