RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 IGLC7A0M8Q6 106 aa10.66□□□□□ -0.7
NEK3-210ENST00000620675 MAS1LP35410 378 aa10.66□□□□□ -0.7
NEK3-210ENST00000620675 WT1-ASQ06250 92 aa10.66□□□□□ -0.7
NEK3-210ENST00000620675 TATDN3Q17R31 274 aa10.66□□□□□ -0.7
NEK3-210ENST00000620675 COQ8AQ8NI60 647 aa10.66□□□□□ -0.7
NEK3-210ENST00000620675 CHPT1Q8WUD6 406 aa10.66□□□□□ -0.7
NEK3-210ENST00000620675 OR10C1Q96KK4 312 aa10.66□□□□□ -0.7
NEK3-210ENST00000620675 NDUFA4L2Q9NRX3 87 aa10.66□□□□□ -0.7
NEK3-210ENST00000620675 AKIRIN2Q53H80 203 aa10.65□□□□□ -0.7
NEK3-210ENST00000620675 C18orf65Q6ZTR6 163 aa10.65□□□□□ -0.7
NEK3-210ENST00000620675 C12orf45Q8N5I9 185 aaPredicted RBP10.65□□□□□ -0.7
NEK3-210ENST00000620675 PRNDQ9UKY0 176 aa10.65□□□□□ -0.7
NEK3-210ENST00000620675 CREBL2O60519 120 aaPredicted RBP10.65□□□□□ -0.7
NEK3-210ENST00000620675 ATG12O94817 140 aa10.65□□□□□ -0.7
NEK3-210ENST00000620675 ZNF429Q86V71 674 aa10.65□□□□□ -0.7
NEK3-210ENST00000620675 OR1L8Q8NGR8 309 aa10.65□□□□□ -0.7
NEK3-210ENST00000620675 MS4A10Q96PG2 267 aa10.65□□□□□ -0.7
NEK3-210ENST00000620675 DMRT1Q9Y5R6 373 aa10.65□□□□□ -0.7
NEK3-210ENST00000620675 ALG5Q9Y673 324 aa10.65□□□□□ -0.7
NEK3-210ENST00000620675 A0A1B0GUS0 222 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 PITX3O75364 302 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 DHFRP00374 187 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 IGLV1-40P01703 118 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 RPLP1P05386 114 aaKnown RBP10.64□□□□□ -0.71
NEK3-210ENST00000620675 TRAPPC2P0DI81 140 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 TRAPPC2BP0DI82 140 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 SULT1A3P0DMM9 295 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 SULT1A4P0DMN0 295 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 HSPE1P61604 102 aaKnown RBP10.64□□□□□ -0.71
NEK3-210ENST00000620675 SMCO1Q147U7 214 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 CXorf66Q5JRM2 361 aaPredicted RBP10.64□□□□□ -0.71
NEK3-210ENST00000620675 WDR89Q96FK6 387 aaPredicted RBP10.64□□□□□ -0.71
NEK3-210ENST00000620675 SPIN2AQ99865 258 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 CITED2Q99967 270 aaPredicted RBP10.64□□□□□ -0.71
NEK3-210ENST00000620675 SPIN2BQ9BPZ2 258 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 SIX6O95475 246 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 IFNA17P01571 189 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 IGHG4P01861 327 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 PSMB8P28062 276 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 AARDQ4LEZ3 155 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 C12orf54Q6X4T0 127 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.64□□□□□ -0.71
NEK3-210ENST00000620675 ZNF580Q9UK33 172 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 TMED3Q9Y3Q3 217 aa10.64□□□□□ -0.71
NEK3-210ENST00000620675 DUXBA0A1W2PPF3 345 aa10.63□□□□□ -0.71
NEK3-210ENST00000620675 C7orf66A4D0T2 115 aa10.63□□□□□ -0.71
NEK3-210ENST00000620675 FGF2P09038 288 aa10.63□□□□□ -0.71
NEK3-210ENST00000620675 OR13C7P0DN81 318 aa10.63□□□□□ -0.71
NEK3-210ENST00000620675 MFAP2P55001 183 aa10.63□□□□□ -0.71
NEK3-210ENST00000620675 PRCDQ00LT1 54 aa10.63□□□□□ -0.71
NEK3-210ENST00000620675 KIAA0141Q14154 515 aaPredicted RBP10.63□□□□□ -0.71
NEK3-210ENST00000620675 OR5B3Q8NH48 314 aa10.63□□□□□ -0.71
NEK3-210ENST00000620675 A0A1B0GU03 582 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 PRAF2O60831 178 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 PF4V1P10720 104 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 CTRB1P17538 263 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 TMEM267Q0VDI3 215 aaPredicted RBP10.62□□□□□ -0.71
NEK3-210ENST00000620675 KRTAP21-3Q3LHN1 58 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 CTRB2Q6GPI1 263 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 OR1S1Q8NH92 325 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 CITED1Q99966 193 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 MAGT1Q9H0U3 335 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 COA4Q9NYJ1 87 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 FKBP11Q9NYL4 201 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 ZNF257Q9Y2Q1 563 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 C13orf42A0A1B0GVH6 325 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 A0A1W2PRX2 142 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 ADARB2-AS1A8MUL3 147 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 SNRPGP15A8MWD9 76 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 FAM25EA8MYX2 175 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 FBXO24O75426 580 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 PSMB6P28072 239 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 SLC35B1P78383 322 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 CD83Q01151 205 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 TEX38Q6PEX7 206 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 TTC9CQ8N5M4 171 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 C3orf56Q8N813 242 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 FAM110DQ8TAY7 271 aaPredicted RBP10.62□□□□□ -0.71
NEK3-210ENST00000620675 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 GPN1Q9HCN4 374 aaPredicted RBP10.62□□□□□ -0.71
NEK3-210ENST00000620675 ZNF355PQ9NSJ1 428 aa10.62□□□□□ -0.71
NEK3-210ENST00000620675 TNFRSF9Q07011 255 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 IAH1Q2TAA2 248 aaPredicted RBP10.61□□□□□ -0.71
NEK3-210ENST00000620675 ZNF747Q9BV97 191 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 RBKSQ9H477 322 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 HSPB7Q9UBY9 170 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 GOSR2O14653 212 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 CRYGCP07315 174 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 RAB9AP51151 201 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 SPCS3P61009 180 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 KHDC1LQ5JSQ8 128 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 OR4D5Q8NGN0 318 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 OR5B12Q96R08 314 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 PLEKHA3Q9HB20 300 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 GSKIPQ9P0R6 139 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 S4R3C0 116 aa10.61□□□□□ -0.71
NEK3-210ENST00000620675 NPIPB5A8MRT5 1133 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 SSNA1O43805 119 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 IFNA21P01568 189 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 HOXA1P49639 335 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms