RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PSMG3Q9BT73 122 aaPredicted RBP4.23□□□□□ -1.73
SHMT1-211ENST00000618902 LYRM2Q9NU23 88 aaPredicted RBP4.23□□□□□ -1.73
SHMT1-211ENST00000618902 COA4Q9NYJ1 87 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 IDI2-AS1Q9NZ38 188 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 AMMECR1Q9Y4X0 333 aaPredicted RBP4.23□□□□□ -1.73
SHMT1-211ENST00000618902 LSM5Q9Y4Y9 91 aaKnown RBP4.23□□□□□ -1.73
SHMT1-211ENST00000618902 WSB1Q9Y6I7 421 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 PLXNB1O43157 2135 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 C7orf77A4D0Y5 90 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 FAM181BA6NEQ2 426 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 RBFOX3A6NFN3 312 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 C5orf52A6NGY3 159 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF98A6NK75 572 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 LY6LH3BQJ8 138 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 UBE2CO00762 179 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 NUPL2O15504 423 aaKnown RBP4.22□□□□□ -1.73
SHMT1-211ENST00000618902 HOXA3O43365 443 aaPredicted RBP4.22□□□□□ -1.73
SHMT1-211ENST00000618902 TXNL1O43396 289 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 IGLV1-47P01700 117 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 IGHV4-59P01825 116 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 HBZP02008 142 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 ADCYAP1P18509 176 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 PI3P19957 117 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 F2RP25116 425 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 NFYBP25208 207 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 S100PP25815 95 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 HTR1DP28221 377 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 GNRHRP30968 328 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 BRS3P32247 399 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 SAA4P35542 130 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 LPAR6P43657 344 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 MEOX2P50222 304 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF134P52741 427 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 DIAPH2-AS1Q14236 149 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 HERPUD1Q15011 391 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 LRRC75BQ2VPJ9 315 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 PRR31Q5SQ13 230 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 AKR1C8PQ5T2L2 129 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 THNSL2Q86YJ6 484 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 SELENOHQ8IZQ5 122 aaKnown RBP4.22□□□□□ -1.73
SHMT1-211ENST00000618902 ABHD12Q8N2K0 398 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM252Q8N6L7 170 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.22□□□□□ -1.73
SHMT1-211ENST00000618902 OR52L2PQ8NGH6 319 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 OR10V1Q8NGI7 309 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 OR10J5Q8NHC4 309 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 PIFOQ8TCI5 191 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 SCGB1C1Q8TD33 95 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 SFT2D1Q8WV19 159 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 CLEC7AQ9BXN2 247 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 NPFFR1Q9GZQ6 430 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 CTDSP1Q9GZU7 261 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 TOLLIPQ9H0E2 274 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM133Q9H2Q1 129 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 TMPRSS5Q9H3S3 457 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 SAV1Q9H4B6 383 aaPredicted RBP4.22□□□□□ -1.73
SHMT1-211ENST00000618902 RPS10P5Q9NQ39 176 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 DPM3Q9P2X0 92 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 PSG11Q9UQ72 335 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 OR2W1Q9Y3N9 320 aa4.22□□□□□ -1.73
SHMT1-211ENST00000618902 TGP01266 2768 aa4.21□□□□□ -1.73
SHMT1-211ENST00000618902 TNCP24821 2201 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 J3QR06 171 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 M0QZ24 198 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 PGLYRP1O75594 196 aaPredicted RBP4.21□□□□□ -1.74
SHMT1-211ENST00000618902 IFNA1P01562 189 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 ARG1P05089 322 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 SERPINE2P07093 398 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 SCTP09683 121 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 RAB5AP20339 215 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 AADACP22760 399 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 PPP1CCP36873 323 aaKnown RBP4.21□□□□□ -1.74
SHMT1-211ENST00000618902 GNG10P50151 68 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 SULT1A1P50225 295 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 PPT1P50897 306 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 RAB7AP51149 207 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 RPP30P78346 268 aaKnown RBP4.21□□□□□ -1.74
SHMT1-211ENST00000618902 EWSR1Q01844 656 aaKnown RBP eCLIP4.21□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF616Q08AN1 781 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 CT45A1Q5HYN5 189 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF506Q5JVG8 444 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 LYZL2Q7Z4W2 148 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 CENPVQ7Z7K6 275 aaPredicted RBP4.21□□□□□ -1.74
SHMT1-211ENST00000618902 Q8N2B8 174 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 SLC35G3Q8N808 338 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 OR4C13Q8NGP0 309 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 OR2G3Q8NGZ4 309 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 OR9G1Q8NH87 305 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 OR2T6Q8NHC8 308 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 CT45A3Q8NHU0 189 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 CD300LFQ8TDQ1 290 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 RXFP4Q8TDU9 374 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 MBD3L1Q8WWY6 194 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 TOMM40LQ969M1 308 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 TVP23CQ96ET8 276 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 C5orf30Q96GV9 206 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 CIB3Q96Q77 187 aaPredicted RBP4.21□□□□□ -1.74
SHMT1-211ENST00000618902 TXNDC17Q9BRA2 123 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF251Q9BRH9 671 aa4.21□□□□□ -1.74
SHMT1-211ENST00000618902 NIPSNAP3BQ9BS92 247 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms