RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 LHFPL4Q7Z7J7 247 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 OR1L8Q8NGR8 309 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 GNPNAT1Q96EK6 184 aaPredicted RBP7.16□□□□□ -1.26
CCDC47-207ENST00000612558 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 COMMD5Q9GZQ3 224 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 PLEKHA3Q9HB20 300 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 LPAR2Q9HBW0 351 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 TBL2Q9Y4P3 447 aaKnown RBP7.16□□□□□ -1.26
CCDC47-207ENST00000612558 ASH1LQ9NR48 2969 aaKnown RBP7.16□□□□□ -1.26
CCDC47-207ENST00000612558 HELZ2Q9BYK8 2649 aaKnown RBP7.16□□□□□ -1.26
CCDC47-207ENST00000612558 ABCA2Q9BZC7 2435 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 A0A1W2PRD5 423 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 A0A1W2PRF3 423 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 A0A1W2PRM7 423 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 VENTXO95231 258 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 OR8U8P0C7N1 319 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 MYOD1P15172 320 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 S100A1P23297 94 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 ATP6V0CP27449 155 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 RAB5CP51148 216 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 F2RL1P55085 397 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 ATP5IP56385 69 aaPredicted RBP7.16□□□□□ -1.26
CCDC47-207ENST00000612558 RAB11AP62491 216 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 PSG5Q15238 335 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 SSX2Q16385 188 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 SLC25A24Q6NUK1 477 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 LRRC75A-AS1Q8N1F1 130 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 SCGB1C1Q8TD33 95 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 CFHR4Q92496 578 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 MALSU1Q96EH3 234 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 SAT2Q96F10 170 aaPredicted RBP7.16□□□□□ -1.26
CCDC47-207ENST00000612558 CXorf58Q96LI9 332 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 HINT2Q9BX68 163 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 PARD6GQ9BYG4 376 aaPredicted RBP7.16□□□□□ -1.26
CCDC47-207ENST00000612558 ZNF430Q9H8G1 570 aaPredicted RBP7.16□□□□□ -1.26
CCDC47-207ENST00000612558 NDUFA4L2Q9NRX3 87 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 PFDN2Q9UHV9 154 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 POLQO75417 2590 aa7.15□□□□□ -1.26
CCDC47-207ENST00000612558 ABCA12Q86UK0 2595 aa7.15□□□□□ -1.26
CCDC47-207ENST00000612558 PLXNB1O43157 2135 aa7.15□□□□□ -1.26
CCDC47-207ENST00000612558 NAV2Q8IVL1 2488 aa7.15□□□□□ -1.26
CCDC47-207ENST00000612558 VPS13CQ709C8 3753 aa7.15□□□□□ -1.26
CCDC47-207ENST00000612558 A0A1W2PN81 502 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 ZNF705EA8MWA4 302 aaPredicted RBP7.15□□□□□ -1.27
CCDC47-207ENST00000612558 INS-IGF2F8WCM5 200 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 MOSP00540 346 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 OPN1MWP04001 364 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 CRYGBP07316 175 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 MSMBP08118 114 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 OPN1MW2P0DN77 364 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 OPN1MW3P0DN78 364 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 MAS1LP35410 378 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 CHRNA7P36544 502 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 BLOC1S1P78537 153 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 LRRC75BQ2VPJ9 315 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 DEFB113Q30KQ7 82 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 ETV3LQ6ZN32 361 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 COMMD7Q86VX2 200 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 THNSL2Q86YJ6 484 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 MMD2Q8IY49 270 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 SLC24A4Q8NFF2 622 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 OR2G3Q8NGZ4 309 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 CITED4Q96RK1 184 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 TMEM147Q9BVK8 224 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 GGACTQ9BVM4 153 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 SH3BGRL3Q9H299 93 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 SIGLEC9Q9Y336 463 aa7.15□□□□□ -1.27
CCDC47-207ENST00000612558 B4DSR2 109 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 UMAD1C9J7I0 102 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 TRIM77I1YAP6 450 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 RRHO14718 337 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 IFNA4P05014 189 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 NPY1RP25929 384 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 CNTFRP26992 372 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 ERHP84090 104 aaKnown RBP7.14□□□□□ -1.27
CCDC47-207ENST00000612558 PJVKQ0ZLH3 352 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 PRSS8Q16651 343 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 MRGPRG-AS1Q2M3A8 158 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 VWC2Q2TAL6 325 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 PPP1R27Q86WC6 154 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 OR2T10Q8NGZ9 312 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 C1orf159Q96HA4 380 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 WDR61Q9GZS3 305 aaKnown RBP7.14□□□□□ -1.27
CCDC47-207ENST00000612558 UQCC1Q9NVA1 299 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 CELSR2Q9HCU4 2923 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.14□□□□□ -1.276e-7■■■□□ 18.2
CCDC47-207ENST00000612558 FBN2P35556 2912 aa7.14□□□□□ -1.27
CCDC47-207ENST00000612558 CENPVL3A0A0U1RRI6 287 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 UBE2L5PA0A1B0GUS4 154 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 NPFFO15130 113 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 ACTL6BO94805 426 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 CA2P00918 260 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 IGKV1D-33P01593 117 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 IGKV1-33P01594 117 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 GATA3P23771 443 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 SNCAP37840 140 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 DLK1P80370 383 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 RUNX1Q01196 453 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 EBI3Q14213 229 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 C2orf83Q53S99 150 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms