RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 IFNA21P01568 189 aa12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 CHRNA7P36544 502 aa12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 HSPE1P61604 102 aaKnown RBP12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 SMCO1Q147U7 214 aa12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 THOC7Q6I9Y2 204 aaKnown RBP12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 MINDY2Q8NBR6 621 aa12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 OR5T1Q8NG75 326 aa12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 WIPF2Q8TF74 440 aaPredicted RBP12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 NDUFA4L2Q9NRX3 87 aa12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 SNRPGP15A8MWD9 76 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 NXPH3O95157 252 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 IFNA17P01571 189 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 PPIFP30405 207 aaKnown RBP12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 KRTAP10-3P60369 221 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 OXA1LQ15070 435 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 TATDN3Q17R31 274 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 TEX38Q6PEX7 206 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 C11orf44Q8N8P7 122 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 OR10W1Q8NGF6 305 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 OR4X2Q8NGF9 303 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 OR1S1Q8NH92 325 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 COA4Q9NYJ1 87 aa12.12□□□□□ -0.47
RPRD1A-208ENST00000589050 SOX15O60248 233 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 FBXO24O75426 580 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 IGHG4P01861 327 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 REG1AP05451 166 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 CD28P10747 220 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 SLC25A6P12236 298 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 AREGP15514 252 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 PRCDQ00LT1 54 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 SRSF4Q08170 494 aaKnown RBP12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 AARDQ4LEZ3 155 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 SPINK9Q5DT21 86 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 OR5M8Q8NGP6 311 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 SRSF8Q9BRL6 282 aaKnown RBP12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 ZNF355PQ9NSJ1 428 aa12.11□□□□□ -0.47
RPRD1A-208ENST00000589050 IGLC7A0M8Q6 106 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 MPTX1A8MV57 137 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 CCSO14618 274 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 OR13C7P0DN81 318 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 PF4V1P10720 104 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 PSMB6P28072 239 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 SPCS3P61009 180 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 WT1-ASQ06250 92 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 FOXE3Q13461 319 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 TMEM65Q6PI78 240 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 HSD17B13Q7Z5P4 300 aaPredicted RBP12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 TTC9CQ8N5M4 171 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 OR52E5Q8NH55 327 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 PLEKHA3Q9HB20 300 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 CACFD1Q9UGQ2 172 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 ALG5Q9Y673 324 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 ATRQ13535 2644 aa12.1□□□□□ -0.47
RPRD1A-208ENST00000589050 C13orf42A0A1B0GVH6 325 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 C7orf66A4D0T2 115 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 FAM25EA8MYX2 175 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 SSNA1O43805 119 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 PITX3O75364 302 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 ELANEP08246 267 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 HOXA1P49639 335 aaPredicted RBP12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 TCTEX1D4Q5JR98 221 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 HIST2H2BDQ6DRA6 164 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 LCNL1Q6ZST4 164 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 MRPL41Q8IXM3 137 aaKnown RBP12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 MS4A10Q96PG2 267 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 ENY2Q9NPA8 101 aa12.09□□□□□ -0.47
RPRD1A-208ENST00000589050 TCRBV4S1A1TA0A5B7 111 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 C5orf51A6NDU8 294 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 CEBPZOSA8MTT3 80 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 H3BUA1 57 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 PRH1P02810 166 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 CRYGCP07315 174 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 CTRB1P17538 263 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 PSMB8P28062 276 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 TNFRSF9Q07011 255 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 IAH1Q2TAA2 248 aaPredicted RBP12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 PDLIM3Q53GG5 364 aaPredicted RBP12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 KHDC1LQ5JSQ8 128 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 CTRB2Q6GPI1 263 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 C19orf35Q6ZS72 473 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 OR10C1Q96KK4 312 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 CITED1Q99966 193 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 CITED2Q99967 270 aaPredicted RBP12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 KLK15Q9H2R5 256 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 HSPB7Q9UBY9 170 aa12.08□□□□□ -0.48
RPRD1A-208ENST00000589050 GOSR2O14653 212 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 TRGV3P03979 118 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 RPLP1P05386 114 aaKnown RBP12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 DEFA4P12838 97 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 RAB9AP51151 201 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 TPPP2P59282 170 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 ERHP84090 104 aaKnown RBP12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 CD83Q01151 205 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms