RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SHROOM3Q8TF72 1996 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 TRGV5A0A0B4J1U4 118 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 DPRXA6NFQ7 191 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 SIGLEC16A6NMB1 481 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 PIRO00625 290 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 TXNDC9O14530 226 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 C1QBP02746 253 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 PRM2P04554 102 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 TFPTP0C1Z6 253 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 LGALS3P17931 250 aaKnown RBP1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 G6PCP35575 357 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 HBA1P69905 142 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 RPL19P84098 196 aaKnown RBP1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 AKR1C1Q04828 323 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 TNFRSF9Q07011 255 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 TAF9Q16594 264 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 TMED4Q7Z7H5 227 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 RASSF5Q8WWW0 418 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 TOMM6Q96B49 74 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 DERL1Q9BUN8 251 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 PARVBQ9HBI1 364 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 OPTCQ9UBM4 332 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 SLIT2O94813 1529 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 HECW1Q76N89 1606 aa1.99□□□□□ -2.09
LSM6P2-201ENST00000552208 ATG2BQ96BY7 2078 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 MUC21A0A0G2JKD1 596 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 A0A0J9YW62 118 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 MUC21A0A140T8X8 626 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 E7EQL1 145 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 ZNF73O43830 326 aaPredicted RBP1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 BPGMP07738 259 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 RBP1P09455 135 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 UCHL1P09936 223 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HIST1H2BOP23527 126 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HLA-DMBP28068 263 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HIST1H2BBP33778 126 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 FUSP35637 526 aaKnown RBP eCLIP1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HIST1H2BDP58876 126 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HSPE1P61604 102 aaKnown RBP1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 AP1S1P61966 158 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HIST1H2BCP62807 126 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 POU6F1Q14863 301 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 SS18Q15532 418 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HIST2H2BEQ16778 126 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 IBA57Q5T440 356 aaKnown RBP1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 LCE3AQ5TA76 89 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 AADACL3Q5VUY0 350 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 Q8NDZ9 215 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 OR11H6Q8NGC7 330 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 H1FXQ92522 213 aaKnown RBP1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HIST1H2BHQ93079 126 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HIST1H2BNQ99877 126 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HIST1H2BMQ99879 126 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 HOPXQ9BPY8 73 aaPredicted RBP1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 CACNA1SQ13698 1873 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 RTL1A6NKG5 1358 aa1.98□□□□□ -2.09
LSM6P2-201ENST00000552208 ZNF532Q9HCE3 1301 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 hCG_1818297A0A087WSY0 165 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 A8MT66 165 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 OR2J2O76002 312 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 IGHV3-7P01780 117 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 C8GP07360 202 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 LGALS1P09382 135 aaKnown RBP1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 GZMHP20718 246 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 EVX1P49640 407 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 RPL18Q07020 188 aaKnown RBP1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 GOLT1AQ6ZVE7 132 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 LHFPL1Q86WI0 220 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 NEK7Q8TDX7 302 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 SLC7A6Q92536 515 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 IMMP2LQ96T52 175 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 TUBA4BQ9H853 241 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 ATPIF1Q9UII2 106 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 CYSLTR1Q9Y271 337 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 TIMM22Q9Y584 194 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 ZNF407Q9C0G0 2248 aa1.97□□□□□ -2.09
LSM6P2-201ENST00000552208 TRAV9-1A0A075B6T8 112 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 TRAPPC13A5PLN9 417 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 SDHAF1A6NFY7 115 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 BUB1B-PAK6H3BSN5 160 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 S1PR2O95136 353 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 OR4E1P0C645 316 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 CSRP1P21291 193 aaKnown RBP1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 RPL28P46779 137 aaKnown RBP1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 TPI1P60174 286 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 RAB14P61106 215 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 HIST1H4AP62805 103 aaKnown RBP1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 MOGQ16653 247 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 RPL22L1Q6P5R6 122 aaKnown RBP1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 ZNF767PQ75MW2 155 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 OR51T1Q8NGJ9 327 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 GNPDA2Q8TDQ7 276 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 GPR146Q96CH1 333 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 Q9BRP9 147 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 GID8Q9NWU2 228 aa1.96□□□□□ -2.1
LSM6P2-201ENST00000552208 TRAV7A0A075B6U4 112 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 GGT3PA6NGU5 568 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 FABP5P3A8MUU1 101 aa1.95□□□□□ -2.1
LSM6P2-201ENST00000552208 H3BT86 120 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms