RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MPDZO75970 2070 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 NCOA6Q14686 2063 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-217ENST00000541578 A0A087WXM4 84 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 CENPVL3A0A0U1RRI6 287 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 C9J4A7 227 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 COPEO14579 308 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 OR2A4O95047 310 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 IFNA7P01567 189 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 IFNA17P01571 189 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 HLA-DQB1P01920 261 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF25P17030 456 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-217ENST00000541578 AKR1C4P17516 323 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 NELFEP18615 380 aaKnown RBP2.74□□□□□ -1.97
SNHG1-217ENST00000541578 PRTN3P24158 256 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 DDTP30046 118 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 SDC4P31431 198 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 OPRK1P41145 380 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 NUDT2P50583 147 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 DEFA1P59665 94 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 DEFA3P59666 94 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 RPS20P60866 119 aaKnown RBP2.74□□□□□ -1.97
SNHG1-217ENST00000541578 RAB5BP61020 215 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 HBG1P69891 147 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 HBG2P69892 147 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 PITPNAQ00169 270 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 GNA12Q03113 381 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 EXOC3L4Q17RC7 722 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 ACSBG2Q5FVE4 666 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 FAM231DQ6ZW35 169 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 LYG2Q86SG7 212 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 COMMD7Q86VX2 200 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 PDPNQ86YL7 162 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 FUNDC1Q8IVP5 155 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 ZFP82Q8N141 532 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 C9orf62Q8N4C0 152 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 SLC26A10Q8NG04 563 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 OR4K2Q8NGD2 314 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 OR8J3Q8NGG0 315 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 OR13D1Q8NGV5 346 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 OR6K3Q8NGY3 331 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 OR13G1Q8NGZ3 307 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 FAM45AQ8TCE6 357 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 CASTOR1Q8WTX7 329 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 RNF133Q8WVZ7 376 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 ITLN2Q8WWU7 325 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-217ENST00000541578 DEDD2Q8WXF8 326 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 DDIT4LQ96D03 193 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 CNBD2Q96M20 576 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 OR2A7Q96R45 310 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 STACQ99469 402 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 PHB2Q99623 299 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 ANAPC13Q9BS18 74 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 TMEM208Q9BTX3 173 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 CHCHD7Q9BUK0 85 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 TPT1P8Q9HAU6 139 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 C8orf17Q9NRJ1 99 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 MED11Q9P086 117 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 GSKIPQ9P0R6 139 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 FBXL3Q9UKT7 428 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
SNHG1-217ENST00000541578 COL6A5A8TX70 2615 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 ATRQ13535 2644 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 NUP210LQ5VU65 1888 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 CSMD2Q7Z408 3487 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 CHD3Q12873 2000 aaKnown RBP2.73□□□□□ -1.97
SNHG1-217ENST00000541578 A8MWL6 223 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 C9JQL5 133 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TP53I11O14683 189 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 MAGEB4O15481 346 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-217ENST00000541578 SOCS1O15524 211 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 CYB5R3P00387 301 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-217ENST00000541578 IGLV3-25P01717 112 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 C1QBP02746 253 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TSPAN19P0C672 248 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 LIMS3P0CW19 117 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 LIMS4P0CW20 117 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 GTF2F2P13984 249 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 HIST1H1BP16401 226 aaKnown RBP2.73□□□□□ -1.97
SNHG1-217ENST00000541578 IL3RAP26951 378 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 CA7P43166 264 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 MAGEA12P43365 314 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 GCLMP48507 274 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 KLF3P57682 345 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-217ENST00000541578 DNAJB13P59910 316 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 EMX2Q04743 252 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TAF1AQ15573 450 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-217ENST00000541578 OR8G1Q15617 311 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 FBXL19-AS1Q494R0 122 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 COX19Q49B96 90 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-217ENST00000541578 SYPL2Q5VXT5 272 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 LPCAT4Q643R3 524 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF773Q6PK81 442 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 GRINAQ7Z429 371 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TMED4Q7Z7H5 227 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 C8orf59Q8N0T1 100 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-217ENST00000541578 C15orf56Q8N910 161 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 LFNGQ8NES3 379 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 OR2Z1Q8NG97 314 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms