RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 ATP6V0BQ99437 205 aa5□□□□□ -1.61
IGHV4-55-201ENST00000520889 ZNF747Q9BV97 191 aa5□□□□□ -1.61
IGHV4-55-201ENST00000520889 QTRT1Q9BXR0 403 aaKnown RBP5□□□□□ -1.61
IGHV4-55-201ENST00000520889 ZFP57Q9NU63 452 aa5□□□□□ -1.61
IGHV4-55-201ENST00000520889 HSPB7Q9UBY9 170 aa5□□□□□ -1.61
IGHV4-55-201ENST00000520889 A0A0G2JRQ6 117 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 IGLC7A0M8Q6 106 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 MSGN1A6NI15 193 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 LINC01548A6NM66 108 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 TEX22C9J3V5 150 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 ST8SIA3O43173 380 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 CTRB1P17538 263 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 PSMB8P28062 276 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 PSMB6P28072 239 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 SUB1P53999 127 aaKnown RBP eCLIP4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 ERHP84090 104 aaKnown RBP4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 CYCSP99999 105 aaKnown RBP4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 CD83Q01151 205 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 ID3Q02535 119 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 SRSF4Q08170 494 aaKnown RBP4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 TATDN3Q17R31 274 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 BSXQ3C1V8 233 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 ASPHD1Q5U4P2 390 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 GGNBP1Q5YKI7 109 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 PVRIGQ6DKI7 326 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 CTRB2Q6GPI1 263 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 Q6ZRM9 215 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 NOXA1Q86UR1 476 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 OR2C3Q8N628 320 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 LFNGQ8NES3 379 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 OR5AU1Q8NGC0 362 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 OR52B4Q8NGK2 314 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 SPATA3Q8NHX4 192 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 CIB3Q96Q77 187 aaPredicted RBP4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 CITED1Q99966 193 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 PARP11Q9NR21 331 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 CACNG5Q9UF02 275 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 FBXO7Q9Y3I1 522 aa4.99□□□□□ -1.61
IGHV4-55-201ENST00000520889 TRBV9A0A0B4J1U6 114 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 A0A0G2JLM5 398 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 A0A1B0GW64 132 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 SH2D7A6NKC9 451 aaPredicted RBP4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 CGB1A6NKQ9 187 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 FAM223BA6NKX1 122 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 E7EUB6 86 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 CORTO00230 105 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 FBXO24O75426 580 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 RBMXL2O75526 392 aaKnown RBP4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 SCAF4O95104 1147 aaKnown RBP4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 IFNA17P01571 189 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 OPN1MWP04001 364 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 HOXB5P09067 269 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 OPN1MW2P0DN77 364 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 OPN1MW3P0DN78 364 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 SPNP16150 400 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 HTR2BP41595 481 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 CDX1P47902 265 aaPredicted RBP4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 GNB1P62873 340 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 SRSF2Q01130 221 aaKnown RBP4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 RUNX1Q01196 453 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 TNFRSF9Q07011 255 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 IL15RAQ13261 267 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 ECSCRQ19T08 205 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 CXorf66Q5JRM2 361 aaPredicted RBP4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 SHISA2Q6UWI4 295 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 GSG1LQ6UXU4 331 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 C12orf54Q6X4T0 127 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 NDUFA11Q86Y39 141 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 FAM223AQ8IWN6 122 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 OR4D5Q8NGN0 318 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 OR1P1Q8NH06 330 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 OR1S1Q8NH92 325 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 GRPEL2Q8TAA5 225 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 ABHD5Q8WTS1 349 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 RBMXL1Q96E39 390 aaKnown RBP4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 USMG5Q96IX5 58 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 UBE2E2Q96LR5 201 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 C2orf50Q96LR7 162 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 NOL4LQ96MY1 436 aaPredicted RBP4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 SEC22CQ9BRL7 303 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 FAM103A1Q9BTL3 118 aaKnown RBP4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 NMES1Q9C002 83 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 HIPK2Q9H2X6 1198 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 PLEKHA3Q9HB20 300 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 ENY2Q9NPA8 101 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 THYN1Q9P016 225 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 NSG2Q9Y328 171 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 U3KQ87 197 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 COL6A5A8TX70 2615 aa4.98□□□□□ -1.61
IGHV4-55-201ENST00000520889 ZFHX3Q15911 3703 aa4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 G3V318 75 aa4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 SYNGR2O43760 224 aa4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 SOX15O60248 233 aa4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 ADAP1O75689 374 aa4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 OR13C7P0DN81 318 aa4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 FCGR2BP31994 310 aaPredicted RBP4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 SNCAP37840 140 aa4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 NKX2-1P43699 371 aaPredicted RBP4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 RAB9AP51151 201 aa4.97□□□□□ -1.61
IGHV4-55-201ENST00000520889 TAS2R30P59541 319 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms