RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 KCNS1Q96KK3 526 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 ASCL3Q9NQ33 180 aa10.66□□□□□ -0.7
TRAPPC9-208ENST00000520857 ZNF324O75467 553 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 MAJINQ3KP22 176 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 FBXW9Q5XUX1 488 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 LRRC29Q8WV35 223 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 SIT1Q9Y3P8 196 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 ARFGEF3Q5TH69 2177 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 HYPMO75409 117 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 SELENOTP62341 195 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 RAB1CQ92928 201 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 SGK494Q96LW2 274 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 ZNF703Q9H7S9 590 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 RNF114Q9Y508 228 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 IGKV3D-15A0A087WSY6 115 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 ZNF146Q15072 292 aa10.65□□□□□ -0.7
TRAPPC9-208ENST00000520857 MED13Q9UHV7 2174 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 GPR6P46095 362 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 VHLLQ6RSH7 139 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 OR5B3Q8NH48 314 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 C22orf15Q8WYQ4 148 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 COQ2Q96H96 371 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 IGHV3OR15-7A0A075B7D8 119 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 A0A1W2PS18 150 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 MPV17P39210 176 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 RELBQ01201 579 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 SLC35E4Q6ICL7 350 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 LYG1Q8N1E2 194 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 DEFB108BQ8NET1 73 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 HLA-DQA1P01909 254 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 MYOD1P15172 320 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 ZNF83P51522 516 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 LINC00310P59036 64 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 TAS2R45P59539 299 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 PPP1R35Q8TAP8 253 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 KLF14Q8TD94 323 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 TRIB1Q96RU8 372 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 NABP2Q9BQ15 211 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 GNB1LQ9BYB4 327 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 TMEM167BQ9NRX6 74 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 ZNF355PQ9NSJ1 428 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 POLEQ07864 2286 aa10.64□□□□□ -0.71
TRAPPC9-208ENST00000520857 SMPD2O60906 423 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 CA2P00918 260 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 IGLC2P0DOY2 106 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 IGLC3P0DOY3 106 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 BRWD1-AS2P59051 145 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 UBE2L3P68036 154 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 SSPNQ14714 243 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 OR2Z1Q8NG97 314 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 TECRQ9NZ01 308 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 CNOT1A5YKK6 2376 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 TRBV9A0A0B4J1U6 114 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 CRYABP02511 175 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 AMY1AP04745 511 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 MEOX1P50221 254 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 OR2D3Q8NGH3 330 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 UBE2ZQ9H832 354 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 DUTP33316 252 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 Q0VG73 95 aa10.63□□□□□ -0.71
TRAPPC9-208ENST00000520857 TRAV9-1A0A075B6T8 112 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 HSBP1L1C9JCN9 74 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 GFRA3O60609 400 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 MOB3BQ86TA1 216 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 RNASE8Q8TDE3 154 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 CORO2AQ92828 525 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 WASHC3Q9Y3C0 194 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 PKDREJQ9NTG1 2253 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 NBEAQ8NFP9 2946 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 IGHV3-48P01763 117 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 OR4S2Q8NH73 311 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 ZNF596Q8TC21 504 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 V9GYV3 84 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 HCFC1P51610 2035 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 ADH4P08319 380 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 PRDX2P32119 198 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 ACP7Q6ZNF0 438 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 MRPL52Q86TS9 123 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 BCL2L2Q92843 193 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 ALKBH7Q9BT30 221 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 CLEC7AQ9BXN2 247 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 CDC42EP3Q9UKI2 254 aa10.62□□□□□ -0.71
TRAPPC9-208ENST00000520857 CCL25O15444 150 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 PRRX1P54821 245 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 FOXA3P55318 350 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 ERVK11-1P61568 191 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 VWC2Q2TAL6 325 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 CXXC4Q9H2H0 198 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 INTS1Q8N201 2190 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 TRGV10A0A0A0MS01 117 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 PLAUP00749 431 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 TDGF1P13385 188 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 RPL8P62917 257 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 CX3CL1P78423 397 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 ZNRF1Q8ND25 227 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 MAFAQ8NHW3 353 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 LINC00479Q96M42 142 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 OR8B2Q96RD0 313 aa10.61□□□□□ -0.71
TRAPPC9-208ENST00000520857 PLCE1Q9P212 2302 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms