RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	C7orf66	A4D0T2	115 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	PSMB11	A5LHX3	300 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	SNAPC5	O75971	98 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	SIX6	O95475	246 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	CHRNA7	P36544	502 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	TATDN3	Q17R31	274 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	UXS1	Q8NBZ7	420 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	OR5AU1	Q8NGC0	362 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	RNASE11	Q8TAA1	199 aa	Known RBP	11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	CHPT1	Q8WUD6	406 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	RRNAD1	Q96FB5	475 aa	Known RBP	11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	AIFM2	Q9BRQ8	373 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	ZNF580	Q9UK33	172 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	PRND	Q9UKY0	176 aa		11.35	□□□□□ -0.59
MATR3-238	ENST00000512107	IGHG4	P01861	327 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	RPLP1	P05386	114 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	TRAPPC2	P0DI81	140 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	TRAPPC2B	P0DI82	140 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	HSPE1	P61604	102 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	SRPX	P78539	464 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	SMCO1	Q147U7	214 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	AKIRIN2	Q53H80	203 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	ZNF429	Q86V71	674 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	OR1L8	Q8NGR8	309 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	COQ8A	Q8NI60	647 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	PHB2	Q99623	299 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	HINT2	Q9BX68	163 aa		11.34	□□□□□ -0.59
MATR3-238	ENST00000512107	ANK2	Q01484	3957 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	DUXB	A0A1W2PPF3	345 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	SNRPGP15	A8MWD9	76 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	FGF2	P09038	288 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	SULT1A3	P0DMM9	295 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	SULT1A4	P0DMN0	295 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	CTRB1	P17538	263 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	PSMB8	P28062	276 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	PRCD	Q00LT1	54 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	CTRB2	Q6GPI1	263 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	TTC9C	Q8N5M4	171 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	OR4D5	Q8NGN0	318 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	TMEM170A	Q8WVE7	144 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	MS4A10	Q96PG2	267 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	FANCD2OS	Q96PS1	177 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	CITED1	Q99966	193 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	CITED2	Q99967	270 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	COMMD5	Q9GZQ3	224 aa		11.33	□□□□□ -0.6
MATR3-238	ENST00000512107	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-238	ENST00000512107		A0A1B0GU03	582 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	PRAF2	O60831	178 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	FBXO24	O75426	580 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	ACTL6B	O94805	426 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	ATG12	O94817	140 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	DHFR	P00374	187 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	CRYGC	P07315	174 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	PSMB6	P28072	239 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	CD83	Q01151	205 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	IL15RA	Q13261	267 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	MYOZ3	Q8TDC0	251 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	ZNF747	Q9BV97	191 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	MAGT1	Q9H0U3	335 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	RBKS	Q9H477	322 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	ZNF257	Q9Y2Q1	563 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107	TMED3	Q9Y3Q3	217 aa		11.32	□□□□□ -0.6
MATR3-238	ENST00000512107		A0A1B0GUS0	222 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	CREBL2	O60519	120 aa	Predicted RBP	11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	OR13C7	P0DN81	318 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	C12orf54	Q6X4T0	127 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	OR2C3	Q8N628	320 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	RNF152	Q8N8N0	203 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	OR5B3	Q8NH48	314 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	SPIN2A	Q99865	258 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	SPIN2B	Q9BPZ2	258 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	GNB4	Q9HAV0	340 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	COA4	Q9NYJ1	87 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	HSPB7	Q9UBY9	170 aa		11.31	□□□□□ -0.6
MATR3-238	ENST00000512107	C13orf42	A0A1B0GVH6	325 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	NPIPB5	A8MRT5	1133 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	GOSR2	O14653	212 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	NDUFB8	O95169	186 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	TMEM50A	O95807	157 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	IFNA17	P01571	189 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	PF4V1	P10720	104 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	SLC25A6	P12236	298 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	CXCL3	P19876	107 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	RAB9A	P51151	201 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	H2BFS	P57053	126 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	SPCS3	P61009	180 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	TNFRSF9	Q07011	255 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	FOXE3	Q13461	319 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	FCN2	Q15485	313 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	IAH1	Q2TAA2	248 aa	Predicted RBP	11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	KLK9	Q2XQG4	91 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	OR52E5	Q8NH55	327 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	OR1S1	Q8NH92	325 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	P2RX4	Q99571	388 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	KLK9	Q9UKQ9	250 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms